Pairwise Alignments

Query, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

Subject, 311 a.a., DNA polymerase III subunit delta' from Synechococcus elongatus PCC 7942

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 93/328 (28%), Positives = 141/328 (42%), Gaps = 66/328 (20%)

Query: 18  RSRHAHAYLLHGPQGIGKRAMAERLMARLLCQQPQGLDACGACKSCLLLKAGSHPDNFVL 77
           R R A AYL  GP G G R +A R  A LL     G  A            G+HPD   +
Sbjct: 23  RDRLAPAYLFAGPDGTG-RGLAARCWAPLLLADQSGRVA-----------RGNHPDLLWV 70

Query: 78  EPEEADK--------------------PIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEA 117
           EP  + +                     ++++Q+R++  F+ +      R +V+IE  E 
Sbjct: 71  EPTYSQQGTLIPASQAQAQGIQRRTPPQVRLEQIRQITQFLARPPLAAPRSLVVIEQAET 130

Query: 118 MNVNASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQSQAWLAGA 177
           M   A+N LLK+LEEP G   ++L+   P  LLPT+ SRCQ++   + S  Q+ A +   
Sbjct: 131 MAEAAANGLLKTLEEP-GQATIILMAPSPELLLPTLVSRCQRIPFYRLS-EQAMAQILQT 188

Query: 178 LPDCDEVERDELLTLAAGSPLMAVSLQAQGVREQRALVTDGVKKLLKQQQSPSQLADAWS 237
               + ++   +L LA GSP  A+S   Q                   Q  P +L D   
Sbjct: 189 HGFTEILDAPAVLALAQGSPGAAISHWQQ------------------LQAIPPELRDRLQ 230

Query: 238 GVPLLLLFDWFCDWTHLILRYQLTQD-EEGLGLADMRKVVQYLAQKSRQAKVLEVQAWI- 295
             P             L +  +L Q  + GL +     + +YL Q+    + L+ Q  + 
Sbjct: 231 QRP-----------NSLQVALELAQAIDAGLDVEAQLWLCRYLQQQGWSQQQLQSQQLLQ 279

Query: 296 LEQRQKVLGKANLNRALLLESLLAHWLQ 323
           LEQ QK L +A +   L+ E LL+ W+Q
Sbjct: 280 LEQAQKQL-RAFVQPRLVWEVLLSAWVQ 306