Pairwise Alignments

Query, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

Subject, 382 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 38/229 (16%)

Query: 14  QLAGRSRHAHAYLLHGPQGIGKRAMAERLMARLLCQQPQGLDACGACKSCLLLKAGSHPD 73
           Q    +R +HA L   P G G   +A      + C      D+CG C SC   +   HPD
Sbjct: 18  QTVKENRISHAQLFLSPAGSGAVPLAIAYAQFINCLNKGENDSCGECSSCRKYERLIHPD 77

Query: 74  NFVLEPEEADKPIK--VDQVRELVAFVVQTAQL----------GGRKVVLIEPVEAMNV- 120
                P  A   +K  +D + E  A ++Q                 K   I   E  ++ 
Sbjct: 78  LHFSYPFFASASVKTAIDVLEEWRAMLMQDPYFDMDIWRSKLDAANKQANINIAECHDII 137

Query: 121 ------------------------NASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSR 156
                                    A NALLK +EEP  +T+ +L+     ++L TI SR
Sbjct: 138 KKLSYKAFEAETKVLIMWLPEYLDKAGNALLKLIEEPPANTLFILIAQSQDQILTTILSR 197

Query: 157 CQQVACPQPSLAQSQAWLAGALPDCDEVERDELLTLAAGSPLMAVSLQA 205
            Q V  P+ S  +   +L  A     E +  +   LA G+ + A +L A
Sbjct: 198 TQIVKIPKLSSEEVTGYLLNA-SGLTEHQAIDYSFLADGNLIEAKALAA 245