Pairwise Alignments

Query, 388 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 1001 a.a., beta-N-acetylglucosaminidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 55.8 bits (133), Expect = 5e-12
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 7/124 (5%)

Query: 6   GFDDRALARVEAAIRADVESGIYDGAVIKVARHGQIALDATIGFSNRRAGAAMREDAVFK 65
           G    AL R+++     V  G Y G  + V + G + +D T G       A ++   ++ 
Sbjct: 583 GLSSVALQRIDSIALDGVRQGAYPGCQVIVMKEGHVMVDKTFGTHTGTGSARVQPTDIYD 642

Query: 66  VLSLTKAFTTTLVL-EAIDLGLLSLTTRVVDVIPEFWGRDLFRSGRKERVNVGHLLTHRA 124
           + SL+K   T L L +  D G  +LT R+ D +P        +   K+ + +  LL H++
Sbjct: 643 LASLSKTTGTVLALMKLYDKGRFNLTDRIADYLP------FLQRTNKKDITIQELLYHQS 696

Query: 125 GLSP 128
           GL P
Sbjct: 697 GLPP 700



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 20/124 (16%)

Query: 250 GAMTSAQDVFVFAEMLREQGTVRDERILSPAVVRKATTLQTGDAINDLYKLLADARHWDL 309
           G  ++A++V    +ML   G +  +R LS    +  TT        ++ K+         
Sbjct: 874 GLFSNAREVAQVYQMLLNGGELNGQRYLSKETCQLFTT--------EVSKI--------- 916

Query: 310 PAGNMGLGFALGGD-GLTVSQFGTLTSPGTFGNFGAGSTLFWVDPESQITFVCLTAKVME 368
                GLGF          S  G  T    +G+ G   T  WVDP++ + +V L+ ++  
Sbjct: 917 --SRRGLGFDKPDTRNPEKSPCGKHTPAKVYGHTGFTGTCAWVDPDNGLVYVFLSNRIYP 974

Query: 369 ESEN 372
           +  N
Sbjct: 975 DVTN 978