Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 6e-40
 Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 9/304 (2%)

Query: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60
           +++R +DLNLL +L++L   +++S AA+ L MSQP  S +L RLRE F D L +      
Sbjct: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65

Query: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120
           R T     + + +   L  I+H +L    F P     +FTI   D   ++ VP +L R  
Sbjct: 66  RLTAKGERLCSELERTLNTIRH-MLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124

Query: 121 EDAPNTDLRCVSL-PHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRN 179
           + APN  L+ V    +  L   LE+ + DL + Y  D     V  Q LF  N+  ++ RN
Sbjct: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVA-DLLL-YSTDESPTNVFKQRLFNDNYAVVMCRN 182

Query: 180 HPSIGDTLSLEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIAS 239
           HP     ++LE +  + H++++  G  +   +  L++L  QR V   +PHF  VP+L+ +
Sbjct: 183 HPLANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLIN 242

Query: 240 TNMVATVPLSLGVWFASE-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFR----NAV 294
           T+++AT+P  L        +I +   P     F ++  WH      P   W R    N V
Sbjct: 243 TDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLV 302

Query: 295 FEEL 298
           +EE+
Sbjct: 303 YEEI 306