Pairwise Alignments

Query, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  257 bits (657), Expect = 1e-72
 Identities = 176/524 (33%), Positives = 281/524 (53%), Gaps = 27/524 (5%)

Query: 197 SRSALKPCVFEPFFSRVNGQKTLVTSIVFPLLVDNKRVGSLLVDISLDGLQSVSQDTSRK 256
           +++A KP   EP+ S     +TLV ++  P+    + +G    +++LD L    +D    
Sbjct: 139 AKAAGKPITTEPYVSVT--MQTLVVTLAEPVRYQGQLIGVAASNLALDKL---IKDVLAI 193

Query: 257 LYEGQAGISVITPSGLLAGHSPDVRLVGKYLNAIDSDDAAELVRLLNTEPGKHSL---KG 313
              G+    ++   G +  H P   L+   L   +   A   +  LN     HSL     
Sbjct: 194 EVPGKGYAILVNQKGKIVAH-PTQDLI---LKPTEEMSAQLTISKLNIAAKDHSLFQLSM 249

Query: 314 EARMKTLVTFEPIPDDAPWGVLLDIPESVLIEPAEVLRRQLDQRNTTGSLVELGLGL-LA 372
           + R K L+  E    D  W +++ + + VL +P   +            +V++G+GL + 
Sbjct: 250 DGRDKVLMAEEVANTD--WLLVMVMDKGVLEQPLNDML-----------MVQIGIGLGIL 296

Query: 373 AIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGELVAWFNSLLD 432
            ++ LL  W +AR + + +  +A  L DIA GDG+LT RL    QDE+G L   FN  +D
Sbjct: 297 LVMALLTSWFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVD 355

Query: 433 KLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQEMNATAQDVAR 492
           +L   +  V+    A    AD +AA A Q S  +  Q  ++ +V TA  EM +   ++A 
Sbjct: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415

Query: 493 SAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATHSEKIGMVLEV 552
           +A   AK A  + Q   +G + + ++  SID LA +++ A+  +  L  H+ +I  +L  
Sbjct: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILST 475

Query: 553 IRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRIVIEHLQSG 612
           IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L++RT  S EE +  I  LQ  
Sbjct: 476 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKV 535

Query: 613 TESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAAEEQNAVAEEI 672
           T + V+ M++S +L   SV  V+Q   +L  I +A+  I+ M  QIASAAEEQ+ V  +I
Sbjct: 536 TTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADI 595

Query: 673 NCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716
           N N   +R+V++ +++ A +S + + S++ +A +    +++F++
Sbjct: 596 NVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639