Pairwise Alignments

Query, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (650), Expect = 7e-72
 Identities = 191/586 (32%), Positives = 303/586 (51%), Gaps = 39/586 (6%)

Query: 135 LDGKDEIFVGNTALGSNDKGRFALNWTQSNTGQITSIVISENELDSAKNASSINQNGTRN 194
           LD  ++ F  +     N KG F         G  +   + EN+     NA    +     
Sbjct: 73  LDPTNKAFAKSVLESPNLKGSFLA----IGLGYESDATVVENDDGWEPNADYDPRKRPWY 128

Query: 195 TCSRSALKPCVFEPFFSRVNGQKTLVTSIVFPLLVDNKRVGSLLVDISLDGLQSVSQDTS 254
             ++   K  V EP+       K ++ SI  P+   +  VG++  D+ L  L  +    +
Sbjct: 129 VDAKRERKLVVTEPYVDI--STKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQLVNSVN 186

Query: 255 RKLYEGQAGISVITPSGLLAGHSPDVRLVGK----YLNAIDSDDAAELVRLLNTEPGKHS 310
             L++    + + T  G+   H P+    G+    +L  +D  +  + + L     GK+ 
Sbjct: 187 --LFDA-GYLFITTKDGVTIAH-PNAENNGEKFSQFLPNVDLKEGTQRIEL----DGKYY 238

Query: 311 LKGEARMKTLVTFEPIPDDAPWGVLLDIPESVLIEPAEVLRRQLDQRNTTGSLVELGLGL 370
           L         V F  +P ++ W +   + ES+     + LR          SL+   +G+
Sbjct: 239 L---------VKFAQVPSES-WYIGAVVDESIAFAMVDDLRHS--------SLIYTVIGV 280

Query: 371 LAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGELVAWFNSL 430
           L +I+GL F+    + + KP+  ++  + D+ASG G+LT RL      E   L   FN  
Sbjct: 281 LLSIIGLSFL---IKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVF 337

Query: 431 LDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQEMNATAQDV 490
            + LQ  I  +K          +++   A ++++ M +Q +++  + TA  EM  TA +V
Sbjct: 338 CETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEV 397

Query: 491 ARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATHSEKIGMVL 550
           A +A  AA AA +AD+A+++G  V+  TT SID L+A + +A+ +V+ L   +  I  +L
Sbjct: 398 ANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETIL 457

Query: 551 EVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRIVIEHLQ 610
           +VI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA+RTQ+S  E R +IE LQ
Sbjct: 458 KVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQ 517

Query: 611 SGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAAEEQNAVAE 670
           SG  +V  AM++S+  A  +V +   A  +L +I  A+  I+ MN+QIASAAEEQ+ VAE
Sbjct: 518 SGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAE 577

Query: 671 EINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716
           EIN N   I+D++  ++D A  ++   +   +   +Q  L+N F V
Sbjct: 578 EINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV 623