Pairwise Alignments

Query, 1085 a.a., putative helicase from Pseudomonas putida KT2440

Subject, 1155 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 84.0 bits (206), Expect = 6e-20
 Identities = 204/898 (22%), Positives = 335/898 (37%), Gaps = 161/898 (17%)

Query: 16  KKLPDQSRMPLNLGERTVHSV--VDRDLCNEWGSLIVTGYSGLEQLIQLI--TGRGVGRT 71
           K+ P QSR     G+    SV  + + +  +   LIVTGY      + ++  T   +G  
Sbjct: 27  KEGPPQSRHEA-WGDNATRSVSGLVKSVLQQPSCLIVTGYQDFLSSLTILLETIENLGER 85

Query: 72  P---MRIILGSDPVTVENPKINLGRYDFSEEMREYWL-KRGISLALCGQV--LHCIELIR 125
           P   +RI+ GS+  T +   +       +EE R+++L  RG S+     +  +  ++ I 
Sbjct: 86  PEGSIRIVFGSNSETRQ--VLGGSGRSVAEEARQHFLGARGFSVVDLADLRAVLAMDAIE 143

Query: 126 AGHVRIRY--------PTGYR--RLHAKMYCSAGAVTLGSSNYTGPGLHTQHEANVRFTS 175
            G ++ R           G R   LHAK++        GS+N++  GL      N+ F  
Sbjct: 144 RGIIKFRIFDPDLAEEKLGRRPPMLHAKLFVGGDKALSGSANFSINGLRR----NLEFMD 199

Query: 176 GERA---RFVETNLLAECFWSLGRNAEDAFIELLEQLLKFVTWQEALARACGELLE-SDW 231
              A           AE +W +GR+  +  +E+L  L++ V+ +EA+AR   E    + W
Sbjct: 200 DADAWPELATARCAAAEQYWDMGRDWTETALEILRALIRIVSPEEAVARTVHEAATFTPW 259

Query: 232 AKSYLDSLFEADPLNLWPSQRQGIAQALYLLDTVGAVLVADATGSGKTRMGAHLIRTI-- 289
             +   S          P Q   I +A   +   G   V   TG+GKT +G HL   +  
Sbjct: 260 RVAGETSTGRPPQ----PFQADLIYEAAGTVYEHGFAFVEAPTGAGKTDIGKHLATVLPV 315

Query: 290 -HDR---NW-SLARARKSSMLLICPPLVRKNWDWETAKCGYNIAITSHGLLSRLNPE--- 341
            H +   +W   A  ++   L + P  V KNW   T     N     H  LSR   E   
Sbjct: 316 SHGQTVFSWGERADQQRLGSLALIPASVLKNW---TTNAPANFKPIKHSHLSRRGKEETA 372

Query: 342 --DESSLAIHLSSAQILAVDEAHNFLNQG-SRRTRTLKFNLADQV--------------- 383
             DE + A+  S++ I  VDE+H   ++  +   R+L F  +  +               
Sbjct: 373 ELDEINRAVRSSASMI--VDESHRLSSRYLAPSARSLVFERSPAIWTACLSATLMGNQGL 430

Query: 384 -----------VLFTATPINRSI----------ADLLRLIDILGA----DNFDDDVLAVF 418
                       ++   PI   I           +L+R  D +       +  DD+    
Sbjct: 431 DGLLAFHEKRASIYVPPPITEQINQHMAKVRKRVELVRHFDQMNRRIEDQSVQDDLFDSA 490

Query: 419 ERL---TGFGHGGAETRDDDIPQLQAGIGS----FVVRRTKAQFNAMVDLDPEAYRLPGG 471
           + L           ET    I  LQ G+      +VVRR +       D    A+  P  
Sbjct: 491 KALQVEVNKVERQLETGGLQISALQEGLADALAPYVVRRQRDCIGESADRKSGAFVYPTI 550

Query: 472 RVCRYPNQLSECYSLDEPNQDKRLAREIRALALQFKGMSRFQTALALPDFFKENGVTPER 531
           R  R    LS+        Q +++   I+ALA          T + L     +     E 
Sbjct: 551 RSHREDTALSD--------QQRQIIERIKALA------ECITTGVTLVSADPQRAAHTEI 596

Query: 532 YL--RFRLKAARSLALYQVMSSLRSSRLALYRHIEGEGAAWSRMGLNSEKMKGDHQTGNM 589
            L  + R+     LAL +   +      A  R  E +    + +G N  + +  +  G  
Sbjct: 597 KLHDKSRIHIRNFLALLRASITFAREEWARERDSEADQRGRASIGENLRRAEKQNARG-- 654

Query: 590 LERTAMLAGKIPENHLGVELPRWLSDSAEHRRACEDECLLYTAILERLERMSGHR----- 644
               A+  G +PE     E+     DS              T I +R+ R+  H      
Sbjct: 655 ---IAVPDGALPE-----EVDAETEDSE-------------TPICDRISRLLNHPNLDSI 693

Query: 645 EKRKVQFLMELLDRHDHILAFDHYPITLRYFQHLLDQKRSDHRPFSVLLGIGGNR----- 699
           ++ +   + ++L +H H +        L  +  LL   R   R   V +   G R     
Sbjct: 694 DESRAGVMRDILRKHGHAIFLAERVGVLEVYARLLAGHRG--RGPEVFVVAPGARIKTGK 751

Query: 700 -----RSHEHIQSLLNPNAKSEGKL---IVLCSEALSESVNLQRASTLVHLDMPSVVRIA 751
                RS    Q     + K    L    +  +  ++E +NLQ AS L  + + S V+  
Sbjct: 752 KLHHIRSGADAQEYFGIDGKHVDPLKPRAMFLTFQMAEGINLQIASALGIIGVTSDVKSL 811

Query: 752 EQRVGRIDRMDSCHAEIECWWPKDSREFALRSDETFVQRIFQVESLIG-GNLQLPDDI 808
            Q +GRIDR+DS ++ I  ++  D     L SD     R+  +  L G G   +P ++
Sbjct: 812 IQGLGRIDRIDSPNSRIH-YYTFDLPGLVLSSDHKARARVASIALLSGVGAADVPSEL 868