Pairwise Alignments

Query, 329 a.a., putative Peptidase from Pseudomonas putida KT2440

Subject, 613 a.a., signal peptide peptidase SppA, 67K type (RefSeq) from Shewanella loihica PV-4

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 28/288 (9%)

Query: 42  GIFFKLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQEAASA----DNI 97
           G  FK ++F     ++  F P++  D           ++  +G I +   A+     ++ 
Sbjct: 300 GHSFKQISFYDYQSVIQQFPPVLMHDAVG--------IIVAKGNILNGHQAAGQIGGEST 351

Query: 98  VKSLREAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASG 157
              LR+A  DDK KAVV+R++SPGGS   +  +  E+  L+A    +     +    ASG
Sbjct: 352 SALLRKARFDDKVKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPV--VVSMGTYAASG 409

Query: 158 AYYIASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPE 217
            Y+I+++AD IYA   +L GSIG+    +G + T E    E   +T G   +    FS  
Sbjct: 410 GYWISASADYIYATPTTLTGSIGI----FGMMTTFEDSLAELGIHTDGVSTSGWTAFSST 465

Query: 218 K---PEETRFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVD 274
           +    E     Q  ++  ++ FI++V + RG  +K +E  ++  G +WSG++A  LGLVD
Sbjct: 466 QGISDELKEIIQRHIERGYQDFISLVSEERG--MKPEEVDKIAQGRVWSGKRALELGLVD 523

Query: 275 GLGSASYVAREIVGEKELVDFTV-----QESPFDRFSKRVGASVAEHL 317
            LG       +     +L  F       + SP ++F +++ A    ++
Sbjct: 524 ELGDLEQAVTKAAELAKLEKFDTKLIEQELSPQEQFIQQMFAQAVSYM 571



 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 36/273 (13%)

Query: 46  KLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQ-------EAASAD--- 95
           K++  ++ FG +AL   ++  +++ +       ++++ G + +Q       EAA      
Sbjct: 24  KVILNLFFFGFIALLFVILAGEESPTVEEGSALVLDLSGNVVEQKRQVDPIEAAMKSGKG 83

Query: 96  ----------NIVKSLREAFKDDKTKAVVMRINS---PGGSPVQAGYVYDEIRRLRAEYP 142
                     +++ ++  A  D +  A+V+ I      G S +Q+  + D + R +A   
Sbjct: 84  GQSDGEILLADLLNAIDNAASDKRISALVLDIGHLRWTGISKLQS--IGDALTRFKASGK 141

Query: 143 AIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAY 202
            I     + +      Y++AS AD IY +    V   G++     F   ++KL ++   +
Sbjct: 142 PI---IAMGNWYGQNQYFLASFADTIYLNPQGSVEIEGLSRYRQYFKSALDKLKIKAHVF 198

Query: 203 TSGEHKAFLDPFSPEKPEET--RFWQGVLDTTHRQFIAMVKQGRGERLKD------KEHP 254
             G  K+ ++PF  +   E      + +L      F A V + RG +  D      +   
Sbjct: 199 RVGTFKSAVEPFMRDDMSEAAKSANRELLQDIWDSFEATVSENRGIKQDDLMLSAERYLT 258

Query: 255 ELFSGLIWSGEQAKALGLVDGLGSASYVAREIV 287
           EL      S E A  LG VD L SA     ++V
Sbjct: 259 ELNKANGRSSEMAINLGWVDKLASAEQFRLDMV 291