Pairwise Alignments

Query, 329 a.a., putative Peptidase from Pseudomonas putida KT2440

Subject, 614 a.a., signal peptide peptidase SppA, 67K type (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 28/288 (9%)

Query: 42  GIFFKLLTFVYLFGILALFSPL---MDMDKAASRSASHTALVEVRGVIADQEAAS--ADN 96
           G  FK ++F   +  L L +PL   ++ D      AS T L         Q A     D+
Sbjct: 300 GDSFKQVSF---YDYLTLVTPLPSFIEQDSVGIIVASGTILN------GSQPAGQIGGDS 350

Query: 97  IVKSLREAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGAS 156
               LR+A  D   KA+V+R++SPGGS   +  +  E+  L+A    + +   +  L AS
Sbjct: 351 TADLLRKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVS--MGSLAAS 408

Query: 157 GAYYIASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSP 216
           G Y+I+++AD I+A   +L GSIG+      F  ++  LG+     ++ E  A L     
Sbjct: 409 GGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEW-AGLSVTRT 467

Query: 217 EKPEETRFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGL 276
             P+     Q  ++  +  FI++V + R  ++  ++  ++  G +WSG++A  LGLVD L
Sbjct: 468 LSPQIESVIQRHIERGYLDFISLVAKER--KISLEQVDKIAQGRVWSGKKALELGLVDEL 525

Query: 277 G-------SASYVAREIVGEKELVDFTVQESPFDRFSKRVGASVAEHL 317
           G        A+ +A   + +  L++   + +P  RF +++ ASV+ +L
Sbjct: 526 GDIDQAVTKAAQLANLSLFDTRLIE--QELTPEQRFVQQMFASVSAYL 571



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 28/192 (14%)

Query: 46  KLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQ-------EAA------ 92
           KL+  +  FG LAL    +   +      +   ++ + G I DQ       EAA      
Sbjct: 24  KLILNLIFFGFLALILIAIGSSEDIKVEDNSALVLNLAGSIVDQKQQVDPIEAALKQGNN 83

Query: 93  -SAD------NIVKSLREAFKDDKTKAVVM---RINSPGGSPVQAGYVYDEIRRLRAEYP 142
            S+D      +I+  +  A  D++   +V+    +   G S +Q+  + D + R +    
Sbjct: 84  GSSDGEILLADIIYVIDNATHDNRISTIVLDLAELKRAGISKLQS--IGDALNRFKESG- 140

Query: 143 AIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAY 202
             K    I +      Y++AS A  IY +    V   G++     F   +EKL ++   +
Sbjct: 141 --KKVVAIGNYYEQNQYFLASFATTIYLNPQGSVSLDGLSMYNQYFKSALEKLKIKAHIF 198

Query: 203 TSGEHKAFLDPF 214
             G  K+ ++P+
Sbjct: 199 RVGTFKSAVEPY 210