Pairwise Alignments

Query, 329 a.a., putative Peptidase from Pseudomonas putida KT2440

Subject, 594 a.a., signal peptide peptidase A from Caulobacter crescentus NA1000

 Score =  102 bits (253), Expect = 3e-26
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 31/276 (11%)

Query: 63  LMDMDKAASRSASHT-------ALVEVRGVIADQEAASA-----------DNIVKSLREA 104
           L+D D  ASRS           A++   G I     ASA           D++ ++ R A
Sbjct: 277 LLDFDDYASRSKPTAVKSGPAIAVIGAEGAIITGTDASASPFGGDSNVYSDDVAQAFRAA 336

Query: 105 FKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAV-IADLGASGAYYIAS 163
            +D   KA+V R++SPGGS   +  +   +  L+A   A K   V +    ASG Y+I+S
Sbjct: 337 TEDKDVKAIVFRVSSPGGSDTASEQI---LAALQAAKKAGKPVVVSMGTYAASGGYWISS 393

Query: 164 AADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERR-AYTSGEHKAFLDPFSPEKPEET 222
            AD I A  ++L GSIGV    +     + + GV+ +  +   ++           PE+ 
Sbjct: 394 QADSIIAQPSTLTGSIGVYGGKFAIGEALARFGVDTKDLHVGADYSQAFGAGEGFTPEQR 453

Query: 223 RFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGLG----- 277
             + G +D  +  FI  V +GR   L   +  E+  G +W+GEQAK LGLVD LG     
Sbjct: 454 AKFAGWMDRIYAGFITRVAEGR--NLPPAKVREIAKGRVWTGEQAKQLGLVDELGGYYEA 511

Query: 278 -SASYVAREIVGEKELVDFTVQESPFDRFSKRVGAS 312
              +    ++ G+  +       SPF+ F K +G S
Sbjct: 512 VEKAKALAKVKGDIRIKHMQGGASPFEAFEKFLGVS 547



 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 45/304 (14%)

Query: 42  GIFFKLLTFVYLFGILALFSPLMDMDKAASRSA---SHTAL-VEVRGVIADQE------- 90
           G+F  LL FV     L     L+ M   A+R A   +H  L +++R  + DQE       
Sbjct: 10  GVFVGLLLFVVGVPFL-----LIAMAAGAARPAPVPAHAVLQLDLRNGLTDQEPKSPFAA 64

Query: 91  ----AASADNIVKSLREAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAI-- 144
                 S  +++++LR A KDDK KA+++R+   G +P  A    DE+R     +  +  
Sbjct: 65  FGSSGGSVISVIETLRRAEKDDKVKAILVRLPEGGVAPAAA----DELRLAFKHFREVGK 120

Query: 145 -KLYAVIADLGASG----AYYIASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVER 199
             +YA    L  SG     Y + +A  E +    S   ++G+++    F    +K GV+ 
Sbjct: 121 KPIYAHSQGLYPSGMVTSTYMLGAATSEFWMQPDSSFQAVGISSESMFFKRFFDKYGVKA 180

Query: 200 RAYTSGEHKAFLDP-----FSPEKPEETRFWQGVLDTTHRQFIAMVKQGRGERLKDKEHP 254
                 E+K  ++P     ++P   E T  W G +  T     A+ ++    +L      
Sbjct: 181 EYEQRYEYKNAVNPYLHSDYTPAHRESTLSWMGSVYRTALTSAAVDRKQDPTKLM----- 235

Query: 255 ELFSGLIWSGEQAKALGLVDGLGSASYV---AREIVGE-KELVDFTVQESPFDRFSKRVG 310
           +   G  +  ++A+A GL+D +G  S +   A E  G+  +L+DF    S     + + G
Sbjct: 236 KTLEGGPYIAQEAQAKGLIDKVGQVSDIQAFALEKAGKGAKLLDFDDYASRSKPTAVKSG 295

Query: 311 ASVA 314
            ++A
Sbjct: 296 PAIA 299