Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 327 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

 Score =  282 bits (721), Expect = 9e-81
 Identities = 159/328 (48%), Positives = 212/328 (64%), Gaps = 15/328 (4%)

Query: 1   MTTNTPPTS-----GVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKG 55
           MT   PP       GV++++V  +  GQR+DNFL+  LKG P++L+Y+++R G+VRVN G
Sbjct: 1   MTDPQPPKPPADRVGVRILKVPEDRTGQRLDNFLLGQLKGAPRSLIYKLVRSGQVRVNGG 60

Query: 56  RVKPEYKIQAGDIVRVPPVRLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAV 115
           R K E K++ G+ VR+PPVRL E  + A        RLEAAIV+ED  L+ +NKP G+A 
Sbjct: 61  RAKAERKLEGGEEVRIPPVRLTEEGDKAAPPSAFQARLEAAIVFEDARLLALNKPTGVAS 120

Query: 116 HGGSGLSFGVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALR----- 170
           HGGSG+SFG IE LR LRP+ + LELVHRLDRDTSGLL++AKKRS L  L A +R     
Sbjct: 121 HGGSGISFGAIETLRALRPN-QTLELVHRLDRDTSGLLIVAKKRSALTELQALMREDDRV 179

Query: 171 -GDGVDKRYMALVRGHWPTSKKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFG 229
            G  + KRY+ L+ G  P     V+APL     + GER V+VN  GK +L+ FR+L R G
Sbjct: 180 DGRSITKRYLTLLVGRMPDGVMSVDAPLHIGLRQGGERHVQVNAIGKPSLSHFRLLERRG 239

Query: 230 DFATIVEARPITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIR-ELGGKRLFLHAYAL 288
              +  E R  TGRTHQIRVH  H GH +AGD KYGD + ++ +R ++G +RLFLHA +L
Sbjct: 240 GH-SYCEVRIETGRTHQIRVHAQHLGHAVAGDDKYGDPEVNKRLRDQVGLRRLFLHAASL 298

Query: 289 TVPLPDG-GELKLEAPVDEVWAKTVERL 315
              L +G     L AP+    A+ ++RL
Sbjct: 299 EFALDNGKTPYVLNAPLAPELAEALDRL 326