Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 543 a.a., ribosomal large subunit pseudouridine synthase D from Synechococcus elongatus PCC 7942

 Score =  105 bits (262), Expect = 3e-27
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 25/225 (11%)

Query: 77  PERDEPAPVAQGLL--------QRLEAAIVYEDKALIVMNKPAGI-AVHGGSGLS-FGVI 126
           P RD   P+   LL        + LE  I+YED  L+ + KPAG+ +V G  GL     I
Sbjct: 312 PCRDRCQPILGHLLAGLPPSSDEPLELPILYEDADLLAIIKPAGLLSVPGTRGLQQASAI 371

Query: 127 EALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHW 186
           + LRQ  PD     +VHRLD+ TSG+L++A+ R     L    R   V K Y AL+ G  
Sbjct: 372 QLLRQQFPDLPTYCVVHRLDQATSGILLVARNRPTQVALFEQFRRRQVHKVYEALLEGQP 431

Query: 187 PTSKKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQ 246
             +   ++ PL     R   ++V+  + G+ ALT +R + + GD    +E  PITGRTHQ
Sbjct: 432 DCTAGTIDLPLRPDWTRRPYQLVD-RDRGRPALTYYRCIDQTGDRCR-MELEPITGRTHQ 489

Query: 247 IRVHTLH---AGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYAL 288
           +RVH  H    G  I GD  YG              RL+LHA ++
Sbjct: 490 LRVHMAHPEGLGQPILGDDLYGQ----------SSDRLYLHARSI 524