Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 330 a.a., ribosomal large subunit pseudouridine synthase C protein from Sinorhizobium meliloti 1021

 Score =  180 bits (456), Expect = 5e-50
 Identities = 108/309 (34%), Positives = 174/309 (56%), Gaps = 11/309 (3%)

Query: 9   SGVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGDI 68
           +G++  +V  + AG R+D +      G+    + ++LR G++RV+  R K + +IQ G  
Sbjct: 2   AGIEHRQVDSDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQIRVDGARAKSDTRIQPGQT 61

Query: 69  VRVPPVRL-PERDEPAPVAQGLLQR------LEAAIVYEDKALIVMNKPAGIAVHGGSGL 121
           +R+PP+ + P+  +  P+    L++      L   +++ED  +IV+NKPAG+AV GGSG+
Sbjct: 62  IRIPPLGVDPKEAKSGPIGGRDLRQSPDGELLSRMVLHEDAKVIVLNKPAGLAVQGGSGV 121

Query: 122 SFGVIEALRQLRPDAKEL-ELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA 180
           +  + + L        E   LVHRLDRDTSG+L++A+ R   + L AA R     K Y A
Sbjct: 122 NRHIDKMLEAWTSQKGEKPRLVHRLDRDTSGVLVVARTRGAAQQLTAAFRERDTKKTYWA 181

Query: 181 LVRGHWPTSKKQVNAPLLKSNLRSGERM--VEVNEEGKE-ALTLFRVLRRFGDFATIVEA 237
           LVRG     + +++  L+K     G+R+   +  E+G + A++ +R++ + G     +E 
Sbjct: 182 LVRGVPRKREDKISTWLVKEPTPDGDRVRIAKHGEDGADHAISYYRIVEQAGQNLAWLEM 241

Query: 238 RPITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYALTVPLPDGGE 297
            P TGRTHQ+RVH  H GH I GD KY + D +         RL LHA  + +P P+GG 
Sbjct: 242 EPYTGRTHQLRVHAAHIGHPIIGDPKYFEADVNWTFPGGMQNRLHLHARHIDIPHPNGGR 301

Query: 298 LKLEAPVDE 306
           LK+ AP+ +
Sbjct: 302 LKITAPLPQ 310