Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score =  130 bits (328), Expect = 3e-35
 Identities = 107/340 (31%), Positives = 167/340 (49%), Gaps = 41/340 (12%)

Query: 10  GVQLIEVAPELAGQRIDNFLITALKG-VPKTLVYRILRKGEVRVNKGRV-KPEYKIQAGD 67
           G + +  A + A  R+D FL  AL G   +  +  ++ +G V +N   V +P+ K+  GD
Sbjct: 10  GNRKVLTAGDDAAGRLDAFLTEALAGEFSRNRIKSLIEQGAVSINGATVTEPKRKVHPGD 69

Query: 68  IVRVPPVRLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFG-VI 126
             R+    LPE ++P P  + +       ++YED  LIV+ KPAG+ VH G+G   G ++
Sbjct: 70  SFRIA---LPEPEDPEPKGEAI----PLDVLYEDADLIVLVKPAGLVVHPGAGNWTGTLV 122

Query: 127 EALRQLRPDA-------KELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDG----VD 175
            AL     D+       K   +VHRLD+DTSG++++AK  +  RHL       G    ++
Sbjct: 123 NALIHHCGDSLSGIGGVKRPGIVHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGPLE 182

Query: 176 KRYMALVRGHWPTSKKQVNAPLLKSNLRSGERMV-EVNEEGKEALTLFRVLRRFGD---- 230
           + Y A+V G     K +++APL ++  R+   +  E +++ +EA+T + V+ R+ +    
Sbjct: 183 RAYRAVVWGRPRQLKGKIDAPLGRAGDRTKRAVKREDSDDAREAITHYEVVERYHEKPDG 242

Query: 231 --FATIVEARPITGRTHQIRVHTLHAGHMIAGDSKYG----------DEDFSREIRELGG 278
              A+ VE    TGRTHQIRVH  H GH + GD  YG           E     +     
Sbjct: 243 TSLASTVECHLETGRTHQIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRF-- 300

Query: 279 KRLFLHAYALTVPLPDGGE-LKLEAPVDEVWAKTVERLSA 317
            R  LHA+ L    P  GE +  E PV     + +  L A
Sbjct: 301 PRQALHAFMLQFEHPATGETMHFETPVPADMQELIAALRA 340