Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 324 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (287), Expect = 2e-30
 Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 24/305 (7%)

Query: 15  EVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRV-KPEYKIQAGDIVRVPP 73
           E++    G R+D  +        +T +   +  G V V+   V KP  K+    ++ +  
Sbjct: 10  EISATQTGLRLDQAIAELFPDYSRTRLKEWILGGNVYVDGVVVTKPREKVLESQVIEIEA 69

Query: 74  VRLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFGVI-EALRQL 132
                 +E A  AQ     ++  IVYED  ++V+NK AG+ VH G+G + G +  AL   
Sbjct: 70  TL---EEEVAAEAQ----EIDLDIVYEDDHILVINKQAGLVVHPGAGNADGTLMNALLHH 122

Query: 133 RPDAKELE---LVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHWPTS 189
            P+ + +    ++HRLD+DT+GL+++AK      HL AAL+   + + Y A+V G   T+
Sbjct: 123 CPEIEHVPRAGIIHRLDKDTTGLMVVAKTVEAQTHLVAALQARDITREYEAIVLGTM-TA 181

Query: 190 KKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQIRV 249
              V+AP+ +   +     + V+  G+ ++T +RV  +F    T +  R  TGRTHQIRV
Sbjct: 182 GGTVDAPIGRHPTK--RTHMAVHHSGRPSVTHYRVAEKFRAH-TRLRLRLETGRTHQIRV 238

Query: 250 HTLHAGHMIAGDSKYG-----DEDFSREIREL--GGKRLFLHAYALTVPLPDGGE-LKLE 301
           H  H GH++ GD  YG      ++ S E  E+     R  LHA  L +  P   E +   
Sbjct: 239 HMAHIGHVLVGDPVYGGRPKPPKNASPEFFEVLKNFTRQALHAVRLELAHPVTMEIMSFN 298

Query: 302 APVDE 306
           AP+ E
Sbjct: 299 APIPE 303