Pairwise Alignments

Query, 310 a.a., putative ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  392 bits (1008), Expect = e-114
 Identities = 199/298 (66%), Positives = 240/298 (80%), Gaps = 1/298 (0%)

Query: 4   ALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL I QL KTY  GF+ALKGI L V +GDF+ALLGPNGAGKSTTIGI+S+LVNKTSG V 
Sbjct: 3   ALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVT 62

Query: 64  VFGHDLDREPSALKRCLGVVPQEFNFNQFEKTFDIVVTQAGYYGIPPKLAKERAEQYLTQ 123
           VFG+DLD +    K+ LG+VPQEFNFN FE    IV+ QAGYYG+P  LAKERA++YLTQ
Sbjct: 63  VFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQ 122

Query: 124 LGLWDKRDVQSRSLSGGMKRRLMIARALIHEPRLLILDEPTAGVDIELRRSMWSFLTELN 183
           L LW+KR  ++R+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW FL ++N
Sbjct: 123 LDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQIN 182

Query: 184 QKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRQLLGKLHVETFVLDLKQDLAAA 243
            +G+TIILTTHYLEEAE LCR+IGII  G ++ENT+M+ LLGKLHVETFVLD+  +   A
Sbjct: 183 AQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPIA 242

Query: 244 PVLQGYPCRLLTPHTLEVQVEKDIGITALFGQLALQNIEVQSLRNKTNRLEELFVSLV 301
           P LQG   + +   +LE+++EK  GI  +F QL  Q ++V S+RNK NRLEELFVS+V
Sbjct: 243 P-LQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSIV 299