Pairwise Alignments

Query, 310 a.a., putative ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 309 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  239 bits (611), Expect = 5e-68
 Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 9/307 (2%)

Query: 1   MSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSG 60
           MS+ LSIR L KTY  GFQALKG+ LD+ EG+  ALLGPNGAGK+T I  +  +   TSG
Sbjct: 1   MSAILSIRDLEKTYEGGFQALKGVSLDIEEGEILALLGPNGAGKTTLISTVCGITTPTSG 60

Query: 61  TVNVFGHDLDREPSALKRCLGVVPQEFNFNQFEKTFDIVVTQAGYYGIPPKLAKERAEQY 120
            V+V GHD+  +  A +  +G+VPQE N   FE  ++ V    G +G P   A    E+ 
Sbjct: 61  HVSVGGHDIIEDFRAARSLIGLVPQEINLEPFETVWNSVRFSRGLFGKPRNDAL--LEEI 118

Query: 121 LTQLGLWDKRDVQSRSLSGGMKRRLMIARALIHEPRLLILDEPTAGVDIELRRSMWSFLT 180
           L +L LWDKR  +   LSGGMKRR++IA+AL H+PR+L LDEPTAGVD+ELR+ MW  + 
Sbjct: 119 LRKLSLWDKRKSRIMELSGGMKRRVLIAKALSHDPRILFLDEPTAGVDVELRKDMWDVVA 178

Query: 181 ELNQKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRQLLGKLHVETFVLDLKQDL 240
           EL + G+TIILTTHY+EEAE +   +G+I +G I+      +L+ +L  +   + L   L
Sbjct: 179 ELKRDGVTIILTTHYIEEAEAIADRVGVITNGEILLVEEKARLMAQLGKKQLEVQLTDAL 238

Query: 241 AAAPVLQGYPCRLLTP------HTLEVQVEKDIGITALFGQLALQNIEVQSLRNKTNRLE 294
            A P   G     LT       ++ +   E+  GIT L   +A   + +  ++ + + LE
Sbjct: 239 TAVPDSLGAYGLTLTEDGRGLIYSYDTNAER-TGITTLLNDVAKSGLTLADVQTRQSSLE 297

Query: 295 ELFVSLV 301
           ++FV LV
Sbjct: 298 DIFVGLV 304