Pairwise Alignments

Query, 831 a.a., Type 1 pili subunit FimD from Pseudomonas putida KT2440

Subject, 831 a.a., Outer membrane usher protein FIMD from Pseudomonas fluorescens FW300-N2E2

 Score =  892 bits (2306), Expect = 0.0
 Identities = 458/817 (56%), Positives = 582/817 (71%), Gaps = 12/817 (1%)

Query: 22  LGSSTLL---SAPYSQADSGFQSGFLRQVPGQPQAASAWSLSMLTSDQGLAPGRYRVEVQ 78
           LG+ST L   +   + A   FQSGFLRQ P   + A A +LS L   Q L PGRYRVE+Q
Sbjct: 18  LGASTALLDITPALADATVEFQSGFLRQHPEYTRDAGALALSALGQSQDLGPGRYRVELQ 77

Query: 79  VNLEPAGQHELDFQPGPDGELQPCLPARLLGEWGMRLDALANPEDQASACLDLLTVVPGA 138
           +N    G  ELDF   P+G+L PCL + LL E G+RLD LA+ +   + C+DL +V+PGA
Sbjct: 78  INRRSFGLRELDFSLSPEGDLLPCLSSDLLQELGVRLDGLADNQALNTDCIDLASVIPGA 137

Query: 139 QIVFTPTELHLAISIPQISMRRNTANQVDPSRWDSGINAAFINYQASTLNGRNRSSGRYT 198
            I F   +L L++S+PQI+MRRN +   DP RWD GINAAFINYQ S     ++  G   
Sbjct: 138 NIEFEGAKLWLSLSVPQIAMRRNQSGYADPERWDHGINAAFINYQVSAQQSNHQQGGSSQ 197

Query: 199 SNDLYLNSGINLGEWRLRSTQSWRQGSQGKTEWTRAQTYAQRDIPGTLANLTIGETFTDR 258
           S+DLYLNSG+NLG WRLRS Q+ R+  Q + EW+ A TYAQRD+PG  ANLT+GETFT  
Sbjct: 198 SDDLYLNSGLNLGAWRLRSNQTLRRNEQNQREWSSAYTYAQRDLPGLQANLTLGETFTRG 257

Query: 259 EVFRSVPISGVRVASDMGMLADNQRGYAPIIRGVAQSRAKVEIWQHGYPIYSTYVSAGPY 318
           +VFRS+PI G  +ASD  ML D  +GYAP+IRGVAQ+RAK+E+ Q+GYPIYSTYVS G Y
Sbjct: 258 DVFRSLPIKGAIIASDPDMLPDALQGYAPVIRGVAQTRAKLEVLQNGYPIYSTYVSPGAY 317

Query: 319 AIDDLST-AGSGELEVVVTEADGQVRRFIQPYSTMSNLLRPGVWRYSATVGRYNPSSDLE 377
            IDDL+T  GSGELE+V+TEADGQV R+ QPY+T+SNLLR  +WRYSATVG YN  S+ +
Sbjct: 318 EIDDLTTVGGSGELEIVLTEADGQVHRYTQPYATLSNLLREDLWRYSATVGHYNAISEGD 377

Query: 378 TPLLWQGTLAVGSYWDTTVYGGLMASEFYRAGNLGFSKDLGHLGAVAFDVTQASSAIDNA 437
            PLLWQGTLA G  W TT+YGG M S+FYRA  LG S+DLG LGA+A D++ +    D  
Sbjct: 378 HPLLWQGTLAWGLGWSTTLYGGAMGSDFYRAVTLGASRDLGALGALALDLSHS----DTQ 433

Query: 438 HEREVQGSSYALKYAKAFTTQTNLRFAGYRYSTQGYRDFDEVVRQRSQDTTFSGSRRSRL 497
             ++VQG SY++KY K+F + T LRFAGYRYST+GYRDFDE VR R  D  F GSRRSRL
Sbjct: 434 ASQDVQGKSYSVKYGKSFQSGTQLRFAGYRYSTEGYRDFDEAVRDREHDVRFFGSRRSRL 493

Query: 498 EASVHQSLGRTSSLTLTLSQQDYWRSNATQRQYQFNFNTQHRGVGYNLFASQSLTD---- 553
           EA+++Q +G+ SS+ LT S QDYW++N TQRQ+QFNFNTQH+GV YN++A QSL D    
Sbjct: 494 EAAINQKIGKHSSVNLTFSHQDYWQTNNTQRQFQFNFNTQHKGVTYNVYALQSLRDNDKR 553

Query: 554 RYGNDRQFGLSVTVPLHFGHRANATFDLQHNANGYSQRATLSGSDSARALSYSTSLSRDE 613
                RQ GLSV++PL F   + ATFD+Q+NA  +SQRA+LSG+     L+Y TS+S D 
Sbjct: 554 NMSEQRQMGLSVSLPLDFMPSSTATFDVQNNAGRHSQRASLSGNSLENRLNYRTSISHDS 613

Query: 614 HARKTAALSLGHQAPYASVSAGYTEADNYRSLSLNASGAVLLHADGLEFGRYLGDTAALI 673
             R++A L+LG+Q    SV AG T++ +YR+ SLNASGA+LLHADG+E G YLG+T AL+
Sbjct: 614 QQRQSAELALGYQGATGSVGAGITQSSHYRTTSLNASGALLLHADGIEAGPYLGETLALV 673

Query: 674 EVPGVANVGLQNATGTRTNSRGYALLPYLQPYRTNSVVLETDRLDPDVEIDNGIAQVVPR 733
           EVP +  VG++NATG +TN++G+AL+PYL+PYR N V L+TD L P++EIDNG AQVVPR
Sbjct: 674 EVPDIPGVGVKNATGVKTNAQGFALVPYLRPYRMNQVSLQTDDLGPEIEIDNGTAQVVPR 733

Query: 734 QGAVVKHRFEARRVSRLVLTLHDTQGQPLPFGAQVLAENGTQLGMVGQAGLVMLTNPSQE 793
           +GAVVK  F AR ++RL+++     GQ LPFGAQV    GT LG VGQAG V+L+   + 
Sbjct: 734 RGAVVKTTFTARTINRLLISGQTANGQALPFGAQVSDAQGTVLGTVGQAGQVLLSVGPEP 793

Query: 794 QPLQVSWGEQPNAGCQVHLDELDAPVVDGYRQQTLTC 830
           Q L V W       C++ ++      V GYR Q LTC
Sbjct: 794 QQLNVRWAPGDAPQCRLDVNPQTMEQVQGYRIQALTC 830