Pairwise Alignments

Query, 831 a.a., Type 1 pili subunit FimD from Pseudomonas putida KT2440

Subject, 847 a.a., fimbrial assembly protein from Klebsiella michiganensis M5al

 Score =  394 bits (1012), Expect = e-113
 Identities = 253/800 (31%), Positives = 395/800 (49%), Gaps = 54/800 (6%)

Query: 69  APGRYRVEVQVNLEPAGQHELDFQPGPDGE----LQPCLPARLLGEWGMRLDALANPEDQ 124
           APG Y V++ ++ +     ++ F      +    LQPCL   LL +WG++ D       +
Sbjct: 60  APGTYHVDIILDDQLMDTRDIPFAMAKTADGSEALQPCLSIELLKQWGVKTDLFPQLAVE 119

Query: 125 ASACLDLLTVVPGAQIVFTPTELHLAISIPQISMRRNTANQVDPSRWDSGINAAFINYQA 184
            S C +L   +P A   F      L ISIPQ ++       V P  WD GI AA +NY  
Sbjct: 120 ESDCANL-QAIPQASADFQFGAQRLVISIPQAAIDLPARGYVPPEMWDEGITAAMLNYSL 178

Query: 185 STLNGRNRSSGRYTSNDLYLN--SGINLGEWRLRSTQSWRQGSQGKTEWTRAQTYAQRDI 242
           S  N   ++    +S+  Y N   GIN+G WR R+  +W + S G+ +W    TYAQR I
Sbjct: 179 SGANNWAKTGQGASSDSQYANLRPGINIGPWRFRNYTTWSRESSGQDKWDTVYTYAQRAI 238

Query: 243 PGTLANLTIGETFTDREVFRSVPISGVRVASDMGMLADNQRGYAPIIRGVAQSRAKVEIW 302
                 LT+G++    +VF S+P  G ++ASD  ML D+ +GYAP++RG+A++ A+V + 
Sbjct: 239 IPLKGQLTVGDSSAPADVFDSMPFRGGQLASDDDMLPDSLKGYAPVVRGIARTNAQVVVR 298

Query: 303 QHGYPIYSTYVSAGPYAIDDL-STAGSGELEVVVTEADGQVRRFIQPYSTMSNLLRPGVW 361
           Q+GY IY +YV+ G + I D+  T G+G+L+V + EADG  + F  PY+++  L R G  
Sbjct: 299 QNGYQIYQSYVAPGAFEIRDMYPTGGAGDLDVTIKEADGSEQHFTLPYASLPVLQREGRL 358

Query: 362 RYSATVGRYNP-SSDLETPLLWQGTLAVGSYWDTTVYGGLMASEFYRAGNLGFSKDLGHL 420
           +Y+ T G+Y   +S ++     Q T   G     T+YGGL  S  Y++   G  K++G L
Sbjct: 359 KYAITGGQYRSYNSSVDKTPFGQATAIYGLQHGITLYGGLQESSKYQSLAFGVGKNMGAL 418

Query: 421 GAVAFDVTQASSAIDNAHEREVQGSSYALKYAKAFT-TQTNLRFAGYRYSTQGYRDFDEV 479
           GA++ DVTQ+ S  D   +   QG  +  +Y+K F  T T+   AGYRYST GY    EV
Sbjct: 419 GAISADVTQSWSTPDKTEKS--QGQCWRARYSKNFAGTGTHFSIAGYRYSTSGYYGMQEV 476

Query: 480 VRQRSQDTTFSGSRRSRLEASVHQSLGR-TSSLTLTLSQQDYWRSNATQRQYQFNFNTQH 538
           +      +     RR+R E ++ Q+L R   SLTL+ +++DYW S  +   +   +N   
Sbjct: 477 LDSYGDSSALQERRRNRAELTMSQTLSRELGSLTLSAAREDYWNSARSMASWSVGYNNYW 536

Query: 539 RGVGYNLFASQSLTD-----------RYGNDRQFGLSVTVPLH---------FGHRANAT 578
           R + Y L  + S                 +D+Q   +V+VPL          +G  A+  
Sbjct: 537 RNISYGLTWTYSRNGSAASYDGGRGRNSDHDQQLAFNVSVPLEKFLPQTWASYGMNASKN 596

Query: 579 FDLQHN--ANGY-----SQRATLSGSDSARALSYSTSLSRDEHARKTAALSLGHQAPYAS 631
               HN   NG      S    +        + Y  +++ D            ++A Y  
Sbjct: 597 NGTTHNIGINGVALENNSLNWNVQQGYGTNGVGYIGNMNGD------------YKATYGE 644

Query: 632 VSAGYTEADNYRSLSLNASGAVLLHADGLEFGRYLGDTAALIEVPGVANVGLQNATGTRT 691
           V+AGY+   N   L+    G V+ HADG+   + LG+T  LI+ PG   V ++N  G RT
Sbjct: 645 VTAGYSYDRNSERLNYGLQGGVIAHADGITLSQPLGETNVLIKAPGAYGVNIRNQPGART 704

Query: 692 NSRGYALLPYLQPYRTNSVVLETDRLDPDVEIDNGIAQVVPRQGAVVKHRFEARRVSRLV 751
           + RGY ++  +  YR N + L+   +  DVE++     V P +GAVV+  + A+   R++
Sbjct: 705 DYRGYTVVSNISVYRKNDLTLDPQSMPDDVELEINTDTVTPTRGAVVRADYLAKVGRRVL 764

Query: 752 LTLHDTQGQPLPFGAQVLAENGTQLG-MVGQAGLVMLTNPSQEQPLQVSWGEQPNAGCQV 810
           +TL D     +PFGA V   +G Q   +VG  G V L+   ++  +  +WG Q +  C+ 
Sbjct: 765 MTLTD-NNHFVPFGAVVTLADGNQSNFIVGDRGQVFLSGMPEQGAIVATWGRQSSQQCRA 823

Query: 811 HLDELDAPVVDGYRQQTLTC 830
                      G  + + +C
Sbjct: 824 DFSLPKQSTYAGITEVSASC 843