Pairwise Alignments

Query, 831 a.a., Type 1 pili subunit FimD from Pseudomonas putida KT2440

Subject, 847 a.a., Outer membrane usher protein FimD from Enterobacter sp. TBS_079

 Score =  415 bits (1067), Expect = e-120
 Identities = 266/826 (32%), Positives = 427/826 (51%), Gaps = 36/826 (4%)

Query: 11  MRRQRSALLCLLGSSTLLSAPYSQADSGFQSGFLRQVPGQPQAASAWSLSMLTSDQGLAP 70
           + R  S L+ L G +  + A    AD  F    L      PQ      LS+     G AP
Sbjct: 9   IHRLSSMLVILCGLALAIFAQQVMADDYFNPALLDI--DNPQQGKT-DLSVYEKGPGQAP 65

Query: 71  GRYRVEVQVNLEPAGQHELDFQPGPDGE----LQPCLPARLLGEWGMRLDALANPEDQAS 126
           G+Y+V + +N       ++ F+   D +    LQPC     L   G++      P     
Sbjct: 66  GKYQVNIFINNNKIDTRDVTFKLIKDAQGNHSLQPCFSLDELKNLGIKTRQYP-PLMAKG 124

Query: 127 ACLDLLTVVPGAQIVFTPTELHLAISIPQISMRRNTANQVDPSRWDSGINAAFINYQAST 186
            C D+   +P A   F      L +SIPQ ++ +     +DP  +D GI A  +NY A+ 
Sbjct: 125 QCADI-NAIPAASATFQVRHQQLLLSIPQTALGQVPRGYIDPKTFDEGITAGLLNYSATA 183

Query: 187 LNGRNRSSGRYTSNDLYLN--SGINLGEWRLRSTQSWRQGSQGKTE---WTRAQTYAQRD 241
                R  G   ++  Y+N   G+N+G WR+R+  +W + + G  E   ++   TYAQRD
Sbjct: 184 SQSHARVQGEQDNSSQYVNLRPGLNVGAWRIRNYSTWNRSTTGNEEEHRFSSVYTYAQRD 243

Query: 242 IPGTLANLTIGETFTDREVFRSVPISGVRVASDMGMLADNQRGYAPIIRGVAQSRAKVEI 301
           I    +++T+G++ +  +VF SVP +GV + SD  ML D+++GYAPIIRG A S A V +
Sbjct: 244 IVAMKSDMTVGQSTSPSDVFDSVPYTGVELKSDTDMLPDSEKGYAPIIRGTAHSNALVMV 303

Query: 302 WQHGYPIYSTYVSAGPYAIDDL-STAGSGELEVVVTEADGQVRRFIQPYSTMSNLLRPGV 360
            Q+GY IY   V+ G + I+DL  T  SG+L+V V E DG    F+ PY+++  L R   
Sbjct: 304 RQNGYVIYQNTVAPGAFEINDLYPTGSSGDLQVTVKETDGSESHFVVPYASVPVLQREKN 363

Query: 361 WRYSATVGRYNP-SSDLETPLLWQGTLAVGSYWDTTVYGGLMASEFYRAGNLGFSKDLGH 419
            RYS T GRY     D+E     +G+   G     T YGG   S  Y++  LG  K+LG 
Sbjct: 364 LRYSVTAGRYRSYDKDVEQTPFAEGSAIYGMPLGFTAYGGAQQSRHYQSRALGVGKNLGD 423

Query: 420 LGAVAFDVTQASSAIDNAHEREVQGSSYALKYAKAFTTQ-TNLRFAGYRYSTQGYRDFDE 478
           LGA + DVT+A + +    ++  +G S+ ++Y+K F    T+   AGYRY+++G+   ++
Sbjct: 424 LGAFSLDVTRAKALLKK--QQTSKGRSWRVRYSKDFVASGTHFSLAGYRYNSKGFYTLED 481

Query: 479 VVRQ--RSQDTTFSGSRRSRLEASVHQSL-GRTSSLTLTLSQQDYWRSNATQRQYQFNFN 535
            +    RS D +    RR+R EA+V Q+L     S+TL+L ++ YW  +        ++N
Sbjct: 482 TMESYTRSDDGSAPQQRRARTEATVDQTLPAGWGSVTLSLVKETYWSQSQDMTSMSVSYN 541

Query: 536 TQHRGVGYNLFASQSLT--------DRYGNDRQFGLSVTVPL-HFGHRANATFDLQHNAN 586
               GV Y+L  S +          D   ND QF L+V+VPL  + H   AT++L +  +
Sbjct: 542 NSWHGVSYSLSYSMNKNTQDSDANGDDVMNDNQFSLNVSVPLDRWMHNTWATYNLNNTKD 601

Query: 587 GYSQRATLSGSD-SARALSYSTS--LSRDEHARKTAALSLGHQAPYASVSAGYTEADNYR 643
           G +Q   L+G+      L+++    LS       T+ ++  ++A Y  VS G ++    +
Sbjct: 602 GTTQNIGLNGTALKGDNLNWNIQEGLSSTGSGNSTS-MNADYKATYGEVSGGVSQDKYQQ 660

Query: 644 SLSLNASGAVLLHADGLEFGRYLGDTAALIEVPGVANVGLQNATGTRTNSRGYALLPYLQ 703
           ++++   G  ++HA+G+   + LG+T AL++ PG     + N TG  T+ RGY ++P++ 
Sbjct: 661 TVNVGLQGGAIVHANGITLSQPLGETIALVKAPGTHGTHIANQTGVETDFRGYTVVPFVT 720

Query: 704 PYRTNSVVLETDRLDPDVEIDNGIAQVVPRQGAVVKHRFEARRVSRLVLTLHDTQGQPLP 763
           PYR N++ L+T+ L  + ++ +    V P +GAVV+  F  R  SR+++TL    G+PLP
Sbjct: 721 PYRHNTIALDTETLPDEADVTHAAYVVTPTRGAVVRASFNTRVGSRVLMTL-THNGKPLP 779

Query: 764 FGAQVLAENGTQLGMVGQAGLVMLTNPSQEQPLQVSWGEQPNAGCQ 809
           FGA V  E+     +VG  G   L+   ++  L V+WG+  +  C+
Sbjct: 780 FGATVTTEDKDSEFIVGNDGQTYLSGLPKQGHLAVTWGQDASEHCE 825