Pairwise Alignments

Query, 785 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  287 bits (734), Expect = 3e-81
 Identities = 195/527 (37%), Positives = 289/527 (54%), Gaps = 37/527 (7%)

Query: 291  ELEQARSRALDMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQQLAIAHDS 350
            E+ QA++ A   AQA+A FLANMSHEIRTP+N ++GM  LAL   L   QR+ L     S
Sbjct: 521  EMAQAKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLDERQREYLRKIQHS 580

Query: 351  GKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQN-TAQSVELTCLIASD 409
             + L+ ++NDILD SK +AG+L +E+I FD+  ++ED ++L+S+  T++ +E    +A +
Sbjct: 581  SQHLLGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERATSKGLEFVIEMADE 640

Query: 410  FPSSVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLAAIVGG-----VRLEVRDTGIGIP 464
             P  ++GDP R+ Q++ N  SNA+KFT  G V + +           +R  V DTGIGI 
Sbjct: 641  VPRHLVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVLLRFAVHDTGIGIK 700

Query: 465  EDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFGSC--FTAE 522
                  +F  F QA +  TR+YGGTGLGL + + L + M G +   SEPG GS   FTA 
Sbjct: 701  AGELPTLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELMGGQVGAESEPGRGSTFWFTAR 760

Query: 523  LPLTVHT-EAIPPAP-LHGRVAALSAAGSGLNELLQHLLPAWGLTYQRHDS---C----- 572
            L  + +     PP P L  R   +        +++  +L +        DS   C     
Sbjct: 761  LGRSSNARHRAPPRPDLRTRRLLVVDDHDHARDVVCDMLRSMSFQVSDTDSGNRCLAELQ 820

Query: 573  -ATLVAAVIDLLITD----DVEHLFELRP--ALKTP----ILLVTAYG--NFLPNEQSLA 619
             A+      D++  D    +++ L   R    L+ P    +L++TAYG      +     
Sbjct: 821  RASAAGEPYDIVFLDWQMPEMDGLATAREIRRLELPQPPLVLMITAYGRDELARSAGESG 880

Query: 620  LAPLHQ-LARPLARNALYQTLRRTLQGHEPEH----PLAIPAITQEQGRARILLVEDNPV 674
            L  + + L +P++ + L+ T+ R L   +  H    P A+P +    G  R+LLVEDN +
Sbjct: 881  LQGIEEILIKPVSPSQLFNTVMRILDHEDGPHSAADPEALPDLAPLAG-LRVLLVEDNQL 939

Query: 675  NQLVAKGMLAKLGCQVQLATQGAEALELLAREEFDLVLMDCNMPVMDGYEASRRIRQSGR 734
            NQ VA   LA     V +A  GA ALE + ++ +D++LMD  MPVMDG  A+R IR+   
Sbjct: 940  NQEVASEFLAGANMVVDVADDGASALEKVRQQRYDVILMDMQMPVMDGIAATREIRRQFP 999

Query: 735  WPELPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHWV 781
               LPI+A+TANAM ++RERC AAGMND++AKP    +LL  +  W+
Sbjct: 1000 AAVLPILAMTANAMEQDRERCLAAGMNDHIAKPVDPRDLLGKLLKWL 1046