Pairwise Alignments

Query, 785 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  293 bits (750), Expect = 4e-83
 Identities = 198/534 (37%), Positives = 291/534 (54%), Gaps = 38/534 (7%)

Query: 283  SSLSLSNQELEQARSRALDMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQ 342
            S   L  +EL +AR+ A +  +A++ FLANMSHEIRTP+N ++GM  LA+   L  +QR 
Sbjct: 556  SERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQRD 615

Query: 343  QLAIAHDSGKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLS-QNTAQSVE 401
             +   H++   L+ ++NDILD SK +AG+L LE + F +  ++++ + LL  +   + +E
Sbjct: 616  YVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKANEKGLE 675

Query: 402  LTCLIASDFPSSVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLAAI-VGGVRLE----V 456
            L   + +  P+ ++GDP R+ QI++NL+SNA+KFT  G++ +    +   G R++    +
Sbjct: 676  LLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVDQAGDRVKLQFWI 735

Query: 457  RDTGIGIPEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFG 516
             D GIG+  +    +FQ FTQA    TR+YGGTGLGL+++R L + M G +   S  G G
Sbjct: 736  EDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADSTLGEG 795

Query: 517  S--CFTAELPLTVHTEAIPPAPLHGRVAAL--------SAAGSGLNELLQHLLPAWGLTY 566
            S  CFTA        E   P  L   +A L         AA   L E L+HL     L  
Sbjct: 796  STFCFTAWFGRA--EELARPRTLPASLAGLRVLVADDNGAAREILGEALRHLDLRPDLVA 853

Query: 567  QRHDSCATLV----------AAVIDLLITD--DVEHLFELRPALKTP----ILLVTAYGN 610
               ++ A L              +D  + D   V  L +L+ AL       +++VTAY  
Sbjct: 854  SGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQAQWPRVVMVTAYDQ 913

Query: 611  FLPNEQSLALAPLHQLARPLARNALYQTLRRTLQG-HEPEHPLAIPAITQEQGRARILLV 669
                 Q+  L     L +P++ + L+  L   +   + P  PL I A        RILL 
Sbjct: 914  EELRRQTENLGICGILVKPVSASTLFDVLVSLVDADNAPATPLHIAAPQTRIDGMRILLA 973

Query: 670  EDNPVNQLVAKGMLAKLGCQVQLATQGAEALELLAR---EEFDLVLMDCNMPVMDGYEAS 726
            EDN +NQ +A  +L  +G QV +A  G +A+ELL R   + FDLVLMD  MP +DGY+A+
Sbjct: 974  EDNEINQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSFDLVLMDLQMPHLDGYDAT 1033

Query: 727  RRIRQSGRWPELPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHW 780
             R+R   R+  LPI+A+TA+AMPEERERC A GMND+LAKP     L A +  W
Sbjct: 1034 ERLRCQQRFAHLPILAMTAHAMPEERERCLAIGMNDHLAKPIDPTALAATLARW 1087