Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  299 bits (766), Expect = 2e-85
 Identities = 161/370 (43%), Positives = 231/370 (62%), Gaps = 7/370 (1%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           F  L L+ +IVA + A G+E+P+ IQ Q+IP++L  HD+IG AQTGTGKTAAF LP++ K
Sbjct: 4   FKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEK 63

Query: 68  IDVSKREP-----QALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLRAI 122
           +    R P     +AL+LAPTREL  Q+A   + + K+ P + +  V GG  +  Q   +
Sbjct: 64  LVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSP-LKIGLVVGGVSINKQTEQL 122

Query: 123 RNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPATRQ 182
             G  I+VATPGRL D + R    L+  +YLVLDEAD+ML LGF+ DL  I   +P  RQ
Sbjct: 123 ARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQ 182

Query: 183 TVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQ-AHLMVHADQKIPAVLRLLE 241
           T+LFSAT+P  I  +A  +L +P  V++    +    +EQ  H +   D K   + + L 
Sbjct: 183 TLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQTLT 242

Query: 242 VEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301
                  + F RTK     L   L+  G+KAA+++G+ +Q QRER + + +DG + ++VA
Sbjct: 243 ANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVA 302

Query: 302 TDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVIE 361
           TDVAARG+D+P +THV+N D+P  P++YVHRIGRT R GRDG A+    P E R+L+ IE
Sbjct: 303 TDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIE 362

Query: 362 RVTGQKVAEA 371
           ++ G ++A A
Sbjct: 363 KLMGIQIAVA 372