Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  282 bits (722), Expect = 2e-80
 Identities = 156/382 (40%), Positives = 231/382 (60%), Gaps = 9/382 (2%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           F  L L P I+ AV   GY E + IQQQ+IP++L G D+   AQTGTGKTAAF LP++ +
Sbjct: 3   FDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLIQR 62

Query: 68  I--------DVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQL 119
           +          +K   +AL+LAPTRELALQV  + ++Y K       + ++GG  + PQ+
Sbjct: 63  LLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTH-FRSICLFGGVDIKPQI 121

Query: 120 RAIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPA 179
             ++ G + VVATPGRL DH+ +     + VQ LVLDEAD ML +GF+ D++ I + +P 
Sbjct: 122 AEMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLPK 181

Query: 180 TRQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRL 239
           TRQ++LFSAT  + I+ +A+  L+ P  V++  + Q    I      V   +K   +++L
Sbjct: 182 TRQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIKL 241

Query: 240 LEVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIV 299
           L   E    + F+RTKQ    LA  LE  G  A +++GD +QN+R + +D+ K+G   ++
Sbjct: 242 LRSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKVL 301

Query: 300 VATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQV 359
           VATDVAARGLD+  + +V N ++P+ PE YVHRIGRTGRAGR G A+ LV   E   L  
Sbjct: 302 VATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLAD 361

Query: 360 IERVTGQKVAEARLPNAQAVLD 381
           IE++   ++ +  +   +  +D
Sbjct: 362 IEKLIKMQIEQVAVAGFEPEMD 383