Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  286 bits (732), Expect = 1e-81
 Identities = 156/379 (41%), Positives = 232/379 (61%), Gaps = 13/379 (3%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           F  L L   I+ A+   GY EP+ IQQQ+IP +LAG D++  AQTGTGKTA F LPIL  
Sbjct: 3   FTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPILQL 62

Query: 68  IDVSK----------REPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGP 117
           +  ++          R+P+ LILAPTRELALQV  +  TY + +P +  ++++GG  M P
Sbjct: 63  LSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLP-LKSMSMFGGVGMNP 121

Query: 118 QLRAIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAI 177
           Q+ A++ G  I+VA PGRL DH+ +    LS ++ LVLDEAD ML +GF+ D+  I   +
Sbjct: 122 QIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILALL 181

Query: 178 PAT--RQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPA 235
           P    RQ +LFSAT    I+ +A   L +P+ +++  +  TV  + Q  + V  ++K   
Sbjct: 182 PPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKDV 241

Query: 236 VLRLLEVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGR 295
           +L L E   ++ ++ F RTK     L+  L+ +G ++AAL+G+  Q  R R +   K+G+
Sbjct: 242 LLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEGK 301

Query: 296 LDIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERR 355
           L  +VATD+AARG+D+ ++ +V N ++P   E YVHRIGRTGRAG +G A+ LV   ER 
Sbjct: 302 LVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDERD 361

Query: 356 MLQVIERVTGQKVAEARLP 374
            L+ IER+  + + +  LP
Sbjct: 362 NLRSIERLIKKDLEKEVLP 380