Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  279 bits (714), Expect = 1e-79
 Identities = 156/367 (42%), Positives = 226/367 (61%), Gaps = 6/367 (1%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           FA LDL P ++ A+   GY+ P+ +Q+++IP +LAG D++  AQTGTGKTA+FALP+L +
Sbjct: 3   FADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLLQR 62

Query: 68  I-----DVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLRAI 122
           +       +    +ALIL PTRELA QV  +F  Y  Q   +   AVYGG  + PQ+  +
Sbjct: 63  LAHDPEPTASNSTRALILVPTRELAQQVCDSFVAYG-QFLVLRSYAVYGGVSINPQMMKL 121

Query: 123 RNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPATRQ 182
           R G  I+VATPGRL D  R++      V+ LVLDEAD ML LGF  +L  +F  +P  RQ
Sbjct: 122 RKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQRQ 181

Query: 183 TVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRLLEV 242
           T+LFSAT   +IRS+A++ L++P  ++      T   I+Q  + V   +K      L + 
Sbjct: 182 TLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLYKH 241

Query: 243 EEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVAT 302
           +++D ++ FV+T++   +L   L AKG  A +++GD  Q  R R ++S K G++ ++VAT
Sbjct: 242 KKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLVAT 301

Query: 303 DVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVIER 362
           DVA+RGLD+  +  V N D+P  PE YVHRIGRT RAG  G A+ LV   E  +L  IE 
Sbjct: 302 DVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAIEV 361

Query: 363 VTGQKVA 369
           + GQ ++
Sbjct: 362 LIGQPLS 368