Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

 Score =  283 bits (724), Expect = 1e-80
 Identities = 164/408 (40%), Positives = 238/408 (58%), Gaps = 2/408 (0%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           F+ L L+P  +A +   GY+  + IQ  S+PI LAG D+I QA+TG+GKTAAFAL +LN+
Sbjct: 18  FSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLNR 77

Query: 68  IDVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLRAIRNGAQ 127
           +D  + + QAL+L PTRELA QV       A+    + ++ + GG+PM PQ  ++ +GA 
Sbjct: 78  LDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGAH 137

Query: 128 IVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPATRQTVLFS 187
           I V TPGR+ DHL R    L  +  LVLDEAD ML +GF DD+  +    P  RQT+LFS
Sbjct: 138 IAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLFS 197

Query: 188 ATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRLLEVEEFDA 247
           AT P  I  ++++ LR+P+ VK++ +    + I Q    V    ++ AV  LL      +
Sbjct: 198 ATYPEGIAKLSQQFLRKPREVKLEEQHDD-SKIRQRFFEVADSDRLNAVGLLLNHFRPVS 256

Query: 248 LIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAAR 307
            +AF  TK    DL   L A+G++A AL+G++ Q +R++V+    +    ++VATDVAAR
Sbjct: 257 TLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAAR 316

Query: 308 GLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVIERVTGQK 367
           GLD+ ++  V NVD+  DPE YVHRIGRTGRA +DG AL L +  E   +  IE+  G +
Sbjct: 317 GLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGAE 376

Query: 368 VAEARLPNAQAVLDARIKKLTSSLAPLVAEAEATH-GELFDRLTTDLG 414
           +    L +     + R+     +L  L    E    G++   LT D G
Sbjct: 377 MEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGALTGDAG 424



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 490 GARDGIAAKNLLGAILNEGGLARDAIGRIQVRDSFSLVELPEDGLEKLLSKLKDTRVAGK 549
           G ++ +   ++LGA+  + G A+  IG+I V D  + V +      + + KL D  V GK
Sbjct: 405 GRKEKMRPGDILGALTGDAGYAKHQIGKINVMDMSTYVAVERSIGREAMRKLNDGTVKGK 464

Query: 550 QLKLRRYRE 558
           ++K+R   E
Sbjct: 465 RVKVRMLTE 473