Pairwise Alignments

Query, 312 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (420), Expect = 6e-46
 Identities = 103/299 (34%), Positives = 163/299 (54%), Gaps = 3/299 (1%)

Query: 3   MESFSALECFIRSAEVGSFAEAARRLSLTPAAVGKHVAQLEARLGVRLFQRSTRKLTLTE 62
           M+ ++ +  F+   E+GSF+EAARRL +  +AV K ++ LE  LGV+L QR+TR+L LT+
Sbjct: 1   MDIYANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTD 60

Query: 63  AGQRFLGEVSDSFRTIQYAVANLASAEGQPAGSLRVSMGTVFGRLYVLPLLGEFLRRYPA 122
           AG+++   V  +   +Q A   LAS +G   GSL+VS+  VFG+ ++ PLL EF R+YP 
Sbjct: 61  AGRQYYEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPT 120

Query: 123 ITPDWHFDNRQVDLIGQGFDAAIGGGFELPPGVVARKLTPAHRVLVAAPAYLQRHASIED 182
           I  +   D+R VDL+ +G D  +  G      +VA KL P H +L A+P YL   +    
Sbjct: 121 INLEVSLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRS 180

Query: 183 PQALQRHDGILVRSPQTGRVRSWPLTSRWQAQQPLQLRQAMTMSDSDAACAVAEQGLGIA 242
              L+ H+ +     + G    W    R +  + ++ R  + +++S+    +   G+GIA
Sbjct: 181 LADLRGHNCLFYSYFRGG--LEWSFERRGEVSR-IKPRGNIKVNNSEVIRRLLLDGMGIA 237

Query: 243 LVSLPFAVPYLLAGRLLRVLPDWYVDDGHISLYFAEHKLLPGKTRAFIDFVVEQFAEQG 301
           L+        L AG L+ VL D+      I     E + +P + R FIDF+ +  AE+G
Sbjct: 238 LMPRYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLKQALAERG 296