Pairwise Alignments

Query, 395 a.a., putative uncharacterized transporter YgaY from Pseudomonas putida KT2440

Subject, 406 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

 Score =  110 bits (276), Expect = 6e-29
 Identities = 112/378 (29%), Positives = 165/378 (43%), Gaps = 27/378 (7%)

Query: 3   TPTLSRALILLMATATGLAVASNYYAQPLLHSIAQQFGLSTASAGSIVIAAQLSYGAGLL 62
           TP   RA + L AT      A  Y  QP+L  +  +FG+S ASA   V A  LS    L+
Sbjct: 20  TPAFRRANLAL-ATGGFTCFALLYGTQPVLPQLTHEFGISPASASFSVAAGTLSMALLLI 78

Query: 63  LLAPLGDLFEQRRLITMMTVVSTLGLVISACAPSLPWLLLGTALTGLFSVVAQILVPMAA 122
            L+ + D + + RL+ +  + + L    SA  P    L+L  AL G  + +A +     A
Sbjct: 79  PLSLIADRYGRERLMRLGLLGAALFACASAFMPDFHLLVLCRALLG--ACIAGVPAAAMA 136

Query: 123 TLSE---PHQRGRAVGTLMSGLLLGILLARTAAGFMAELGGWRSIYVLAAALMALTALAL 179
            L E   PH RGRA+G  ++   LG +  R  +  +     WR        L  L A   
Sbjct: 137 YLGEEIAPHARGRAMGLYIAANALGGMSGRFLSALVTGWWDWRHGLGALGLLGLLAAFTF 196

Query: 180 YRSLP--QHHSHAGLKYPALIGSVFRLFIEEPVLRLRSLLGLLAFSLFALFWTPLAFLLA 237
           +R LP  QH     LK   L+  V R++  +P L    +   L    F   +  L F L+
Sbjct: 197 WRLLPPAQHFRPRSLKPRLLLADVGRIY-ADPGLPWLFVTAFLIMGSFVGIYNYLGFRLS 255

Query: 238 NGPYHYSDAVIGLFGLAGAAGALSANWAGRLADR-GKG------SLGTTVGLVVLLLSWV 290
             PY    A IG   L  A G+ S+  AG LADR G+       SL    G+ + L + +
Sbjct: 256 LPPYGLGPAAIGAIFLLYAVGSASSALAGHLADRIGRSRIVLLMSLTMAAGIGLTLAAAL 315

Query: 291 PLGFAEQSLLALLLGVLMLDLAVQLVHVSNQNAVIALRPEARTRLNAGYITCYFIGGA-L 349
           PL         ++LG+ +       VH      V       R  ++A Y++ Y++GG+ +
Sbjct: 316 PL---------IILGLAVFTFGYFAVHAVASGWVGRRAGPRRGLVSALYLSSYYLGGSVI 366

Query: 350 GSLLGTQLFQRQGWMGIV 367
           GS  G   +   GW G+V
Sbjct: 367 GSATGWP-WIHGGWPGVV 383



 Score = 38.1 bits (87), Expect = 5e-07
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 39  FGLSTASAGSIVIAAQLSYGAGLLLLAPLGDLFEQRRLITMMTVVSTLGLVISACAPSLP 98
           +GL  A+ G+I +   +   A   L   L D   + R++ +M++    G+ ++  A +LP
Sbjct: 259 YGLGPAAIGAIFLLYAVG-SASSALAGHLADRIGRSRIVLLMSLTMAAGIGLTLAA-ALP 316

Query: 99  WLLLGTALT--GLFSVVAQILVPMAATLSEPHQRGRAVGTLMSGLLLGILLARTAAGFMA 156
            ++LG A+   G F+V A +        + P +RG      +S   LG  +  +A G+  
Sbjct: 317 LIILGLAVFTFGYFAVHA-VASGWVGRRAGP-RRGLVSALYLSSYYLGGSVIGSATGWPW 374

Query: 157 ELGGWRSIYVLAAALMALTALAL 179
             GGW  +    A L+A  A+ L
Sbjct: 375 IHGGWPGV---VATLLACVAVVL 394