Pairwise Alignments

Query, 685 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 657 a.a., LTA synthase family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (527), Expect = 1e-57
 Identities = 165/620 (26%), Positives = 288/620 (46%), Gaps = 66/620 (10%)

Query: 34  IMLMLSLVRLALLAYNNDMVGDTPYSTVAEG----FLNGLRFDLRVVVYISI-PLLLAML 88
           ++++ +L RL L  ++ D V      T A+G    F +GLR D   + Y+ I P LL  L
Sbjct: 24  LLVIFALSRLGLAMWHFDRV------TNADGWIRIFTSGLRVDFASICYLFILPALLTSL 77

Query: 89  ---SPW-AMARRGVFRFWLTLASSVVMFLGLMEMDFYREFHQRLNGLVFQYIKEDPKTVM 144
                W       + R W+T    +V+++ +    F  E+  R N L  +Y+   PK V 
Sbjct: 78  ISGEHWLGRIWNWILRLWITAGLWIVVYMEVATPPFIIEYDLRPNRLFVEYLIY-PKEVF 136

Query: 145 SMLWYGFP----------VVRYLLAWAFGTWLLSLLFKGIDRVTRAEGLYRVAPWYKRLA 194
            MLW G+           V+  +L W +   L+S L                  WY R  
Sbjct: 137 GMLWSGYKLELFIGLVVSVLTVVLGWRWSKTLVSNL--------------HYPKWYWRPV 182

Query: 195 VFMVILLVAVVAARGTLRQGPPMRWGDAFTTDSNFVNQLGLNGTLTLIDAAKSRFGEDRA 254
           + ++++ V V+ AR +L   P      +F++D   +N L LN   ++I AAK    E  A
Sbjct: 183 IAVLVVTVGVLGARSSLGHRPMNPAMVSFSSDP-LMNDLALNSAYSVIFAAKQMGSEANA 241

Query: 255 NIWKPVLQQDVATQSVREQLLTAHDTLVDADEAAIRRDFVPPADRTLPIKNVVVILMESF 314
             + P + + +    VR  +  A +  +  D+ ++              KN+V++LMES 
Sbjct: 242 FEFYPKMDKQLVIDQVRASMTVAPEDFISDDKPSLANHVATYQGAP---KNIVILLMESH 298

Query: 315 AGHSVGALGSPNNITPYFDKLAKEGLLFDRFFSNGTHTHQGMFATMACFPNLPGFEYLMQ 374
               V +LG  + ++P  DKL  EG  F R ++ GT + +G+ A    F   P    +++
Sbjct: 299 GARYVKSLGGID-VSPNMDKLINEGWAFTRMYATGTRSVRGIEAVTTGFSPTPA-RSVVK 356

Query: 375 TPEGGHKLSGLPALLSARDYDDVYVYNGDFAWDNQSGFFGNQGMTTFIGRNDFVNPVFSD 434
             +  +    +  LL  + Y   ++Y G+  +DN   FF   G         F NP F  
Sbjct: 357 LGKSQNNFFSIAGLLKTQQYHTQFIYGGESHFDNMKSFFLGNGFVDMQDLPTFSNPKFVG 416

Query: 435 PTWGVSDQDMFDRGNEELAKHDGK-KPIYALLQTLSNHTPYALPKDLPVEKVTGQGRLDE 493
            +WG SD+D+F++ +E+  +   + KP ++L+ T SNH+P+  P  +  +    +  ++ 
Sbjct: 417 -SWGASDEDLFNKADEQFTQMAKEGKPFFSLVFTSSNHSPFEYPDGVITQYNEPKQTVEN 475

Query: 494 HLTAMRYSDWALGQFFEKARKEPYFKDTLFVIVGDHGFGNHQQVTELDLGRFNVPLLLIA 553
              A++Y+D+ALGQF EKA+K PY+ +T+FV+V DH     Q    + +  F++P ++  
Sbjct: 476 ---AVKYADYALGQFVEKAKKSPYWDNTVFVVVADHD-ARTQGTNPIPVEYFHIPAVIFG 531

Query: 554 PGIQEKFGAVNHTVGTQVDIVPTIMGRLGGKARHQCWGRDLLN---------LPEGDQGV 604
            GI+ +    +  + +Q+D+ PT++   G  +++   G DL           + + D+  
Sbjct: 532 GGIEAR---KDDRLLSQLDLAPTLLSLAGISSQNPMIGFDLTQDVPVEKQRAMMQRDKNF 588

Query: 605 GMIKPSGSEQIVGLVQGDRI 624
           G + P    Q+V L  G  I
Sbjct: 589 GWLTP--DNQVVVLQPGQDI 606