Pairwise Alignments

Query, 186 a.a., Smr domain protein from Pseudomonas putida KT2440

Subject, 192 a.a., DNA endonuclease SmrA from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (258), Expect = 1e-27
 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 9/182 (4%)

Query: 1   MQDDDFSLFKAEVRGVKPIRHDRAEVGKPKADRQKLAGLRQAATVRSD---KALVIDGMS 57
           M  +D  LF+  +  VK I HD  E+ K     +     R+AA   +D   +AL ID   
Sbjct: 1   MSQEDLELFQQMMGDVKTITHDTVELKKAHQVTEAQLAKREAAVSLADHDPEALSIDHAP 60

Query: 58  DQFVIDVGAEDELMWRRDGVQEGQLRKLKLGQIPFEGSLDLHGMTVEKARETLWDFIAEA 117
                 +  +D L ++RDGVQ+G  RKL+LG+ P +  LDLH  T+++AR  +  FI + 
Sbjct: 61  M-----LKPDDMLEFKRDGVQDGVYRKLRLGKYPIQARLDLHRKTLKEARSEVIQFIRQC 115

Query: 118 TKLEVRCVRVTHGKAARLDGKRPMIKSHVNTWLRQHPQVLGFASCSARHGGTGAVYVMLK 177
             +++R + + HG+  R      ++KS V+ WL Q  +V    S    HGGTGAVYV+L+
Sbjct: 116 MAMDIRTLLIVHGRGER-STPPALMKSFVSHWLTQISEVQCAHSAQRLHGGTGAVYVLLR 174

Query: 178 RT 179
           ++
Sbjct: 175 KS 176