Pairwise Alignments

Query, 186 a.a., Smr domain protein from Pseudomonas putida KT2440

Subject, 196 a.a., Smr domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.7 bits (226), Expect = 7e-24
 Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 3/180 (1%)

Query: 1   MQDDDFSLFKAEVRGVKPIRHDRAEVG-KPKADRQKLAGLRQAATVRSDKALVIDGMSDQ 59
           M D++ +LF  E+ GV P++ D   V  +PKA   +    R A  ++ +  L    +   
Sbjct: 1   MLDNESALFFEEMAGVVPLKGDIKAVNLQPKALTVEQIQRRDA--LQREAYLACMPLELS 58

Query: 60  FVIDVGAEDELMWRRDGVQEGQLRKLKLGQIPFEGSLDLHGMTVEKARETLWDFIAEATK 119
            +  +  +D + ++R+GVQ G  ++L+LGQ   +  LD+H   + +ARE L +++  A  
Sbjct: 59  LIPIIAPDDIVSFKREGVQGGVFKRLRLGQYSIKMELDVHAYRLSQAREALLNYLLAALA 118

Query: 120 LEVRCVRVTHGKAARLDGKRPMIKSHVNTWLRQHPQVLGFASCSARHGGTGAVYVMLKRT 179
              RCV + HGK         ++KS V  WL Q   VL + S     GGTGA+YVML ++
Sbjct: 119 HGERCVMLIHGKGHNSKPVAGLLKSAVCHWLSQLEMVLAYHSAKTEQGGTGALYVMLTKS 178