Pairwise Alignments

Query, 323 a.a., UDP-sugar epimerase from Pseudomonas putida KT2440

Subject, 313 a.a., mRNA-binding protein from Synechococcus elongatus PCC 7942

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 90/323 (27%), Positives = 131/323 (40%), Gaps = 42/323 (13%)

Query: 6   ILVTGASGFVGGALCRQLATLGSFAIRAASRDLGGASVAGIQAVTVADLSATTDWARALS 65
           ILV G S F+G AL RQL   G                    AVTV +  +      AL+
Sbjct: 3   ILVIGGSRFIGVALVRQLLAAG-------------------HAVTVFNRGSRP----ALA 39

Query: 66  GVDLVVHAAARVHVMKETASDSL-AEFRRVNVDGTLNLARQAAAAG-VRRFIFISSIKVN 123
           GV+ +V        + +    S    F     +     A  A+  G  ++ I++SS  V 
Sbjct: 40  GVEQLVGDRQDPAALAQLQGRSFDVVFDNTGREAAETQALVASLDGQFQQLIYVSSAGVY 99

Query: 124 GESSQPGQPLRADDSPAPQDAYGVSKHEAEQGLRQLAAATGMEVVVIRPVLVYGPGVKAN 183
             S Q   PLR  D   PQ  +   K E E  L+Q     G+     RPV +YGPG   N
Sbjct: 100 AASDQ--LPLRESDPVDPQSRHR-GKFETENWLQQ----QGLPFTAFRPVYIYGPG---N 149

Query: 184 FHSMMRW----LQRGVPLPF-GAVCNRRSLVSLANLVDLVVTCIDHPRAANQTFLASDGD 238
           ++ + +W    + R  PLP  G   +   L  + +L   +V  + +PRA  Q +  S   
Sbjct: 150 YNPLEQWFFDRILRDRPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAIGQIYNLSGDR 209

Query: 239 DVSLTQLLRALGLALGRPARLLPVPAGLLRGAVLLIGRRDLAQRLFGTLQVDIEKNRQLL 298
            VS   L RA  +A GR  + L +         L +G+R             I++ RQ L
Sbjct: 210 YVSFDGLARACAIAAGRDPQALHLVH--YDPKQLNLGKRKAFPMRAQHFITAIDQARQDL 267

Query: 299 GWYPPCTLEQGLNMTARSFLGAR 321
            W P  +L  GL  + ++   AR
Sbjct: 268 EWVPRFSLIDGLQNSLQNDYLAR 290