Pairwise Alignments

Query, 471 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 538 a.a., Type I secretion outer membrane protein, TolC (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.4 bits (176), Expect = 4e-17
 Identities = 83/416 (19%), Positives = 171/416 (41%), Gaps = 18/416 (4%)

Query: 35  VSASTYVLDLAGLYREARLEDPRVLAAYARARSASEQQRAALGSLLPQVSANANSSRILR 94
           V A T+   L   Y+     +P + A  A  R+  EQ   AL    PQVS   ++     
Sbjct: 75  VMAETFDEALVSAYQA----NPTLQARRALLRAVDEQVPQALSDWRPQVSVQGSTFYQQM 130

Query: 95  KNEAERDLYNTE--TYSLSLTQYLYN--KPAWERYQKSKSVKDQKG--HEAEDTLAEATV 148
             E  R   +    T  + L Q ++   +   +  Q    V+ ++      E T+    +
Sbjct: 131 DYEPGRKNLDNRPATLGVVLQQNIFRGLRTVAQTDQAKAQVQSERALLRSVEQTVL---L 187

Query: 149 DLAKRYFVALAADDELALVQAERRATQKNLDRVSSMFERQMAKITDKLDMQARVDFLLAQ 208
           + A+ YF  +     L L     +  ++ LD  +  F       TD     +R+   +A 
Sbjct: 188 NAAQAYFNVIRDQAVLELNINNEQVLRRQLDAANDRFRVGEITRTDVAQADSRLAGAIAD 247

Query: 209 EVEARNQVQVSREALAEIVGRPITEPLSRVRNDVALQAPTRPLQNWVTQAVENNPLLKSY 268
            ++A   ++ SR    ++VG P       ++         + L++ +  A+  NP + + 
Sbjct: 248 RIQAEGTLESSRANYTQVVGHPP----ENIQPPPPYARLPQTLEDGLNTALSANPDVIAA 303

Query: 269 QSGAEAANAAVREGKGEHYPQLSLSLSAQQNDQGYDNTQAPRSDSYVASFGVKIPIYSGG 328
                 A AA+R+ +G+  P L+  +S   +      T+   + ++ A   + +P+Y GG
Sbjct: 304 LYVWRQAQAAIRDQRGKLLPTLNAEVSYSFSHNPSATTEYD-TKTFQAGLNLTVPLYQGG 362

Query: 329 STSARVRGLYDDQLAAEEQLEGVRRQVVKETTTAYLTAQAAVEKIRANRNALSSAQHSSV 388
           +  +++R           Q++  R  V++  T+A+ T  +A  ++ + ++ + +A  +  
Sbjct: 363 AVYSQIRDAKHRAGQRRLQVDEQREAVIESLTSAWETLTSARARVSSYKSQIEAAGIALD 422

Query: 389 AAQKAFTFGVVNAVDVLTAVQNEFKARRDLLKTQYDFITNLFLLNRWAGELNQESV 444
             Q+    G    +DVL A Q    +R +L++ + D   + + +    G +  E +
Sbjct: 423 GVQREAQVGSRTVLDVLDAEQELLTSRVNLVRAERDSAISTYEVLAALGAMTAEDL 478