Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (467), Expect = 5e-51
 Identities = 133/444 (29%), Positives = 225/444 (50%), Gaps = 41/444 (9%)

Query: 25  RIGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDL 84
           RI L V+   F +   WA++A +     G G V   +  + +Q+LEGG+VK++  R+G+ 
Sbjct: 51  RIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQ 110

Query: 85  VKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSIPSVIMEGTD----- 139
           V+KG  LI+LD+++  +++     Q+        +L A      SI SVI++        
Sbjct: 111 VQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSA------SISSVIIDENFEEKNW 164

Query: 140 -----------------SDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGL 182
                            SD   + +  ++  ++   D+L  ++SV  ++I+Q QQ     
Sbjct: 165 ANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQ----- 219

Query: 183 NDMIRTKA---GLNKSYSGEIKQL---KELLAEGFVDNQRLLEQERKLDMLKTEVADHQS 236
            D+I  +A    L +SY    K+L   + L  EG V    LL+ +R+L+  + E+   + 
Sbjct: 220 -DLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTEL 278

Query: 237 SITKTKLQIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAP 296
            I   K  + E  L  +   +KF  +   +L+  Q ++  L E    L D+++R V+ +P
Sbjct: 279 KIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSP 338

Query: 297 ESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAF 356
            +G V  + V+T+GGV+     +++IVP +  L+VEA++AP+DI  L     A V+FSA+
Sbjct: 339 VTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAY 398

Query: 357 NQATTPVIEGKLTRISADSLVEERSGDQYYLVRVKVTEDGMKKLGNRKLQPGMPAEVLIN 416
           +      +EG L  ISAD+  ++  G+ +YLVRV+  E  +    N  + PGM A V I 
Sbjct: 399 DFTRYGGLEGTLEHISADT-TQDEEGNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDII 457

Query: 417 AGDRTMLQYLLKPARNMFAESLIE 440
            G RT+L YLLKP  +  + +L E
Sbjct: 458 TGKRTVLDYLLKPILSAQSNALRE 481