Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 583 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Synechocystis sp000284455 PCC 6803

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 83/342 (24%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 119 RLRAERDGLDSIPSVI--MEGTDSD---RAQEALAGEQQVFKARHDSLLGEISVNRERIQ 173
           +LRAER  L     ++  + G +      A+++LA E  +  +    LL E ++ R +++
Sbjct: 256 QLRAERSQLQEDQKILAGLLGRNEAALVEAEKSLAIEAGIVNSM-TPLLEEGALARLQVE 314

Query: 174 QMQQQIAGLNDMIRTKAGLNKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVAD 233
           + QQ              LN      I+Q    + E     Q++  ++ ++  L+TE + 
Sbjct: 315 KQQQS-------------LNDRTQQLIEQKVNTVVEVDRQKQQIESRQAEIQRLETEQSR 361

Query: 234 HQSSITKTKLQIGETELQIVQLKKKFD--ADVAKELSDVQAQV----FDLQEKEAALRDR 287
            QS I++ + ++  T    V  K  +D  AD  K L+++ +Q+     D  ++   L  +
Sbjct: 362 LQSLISQAQARLANTSA--VTDKDIYDRLADNNKRLAEIDSQITKIIVDNDKRLTELNGQ 419

Query: 288 LSRVVIR-------APESGMVLDMKVHTIGGVV--SAATPLLDIVPAQSDLVVEAKVAPR 338
           + R  +        +P  G+V D+K  T G V   +   PLL I+PA S LV E  V  +
Sbjct: 420 IERAKVNLGYQEITSPVDGVVFDLKA-TPGYVTPPNQTEPLLKIIPADS-LVAEVDVTNK 477

Query: 339 DIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGDQY-YLVRVKVTEDGM 397
           DI  +  G   DVR  +F  +    ++G++  + +D+L  +++   Y + VR+K+    +
Sbjct: 478 DIGFVRTGMPVDVRIDSFPYSEFGGVDGEVEYVGSDALPPDQTYQFYRFPVRIKLDSQEL 537

Query: 398 KKLGNR-KLQPGMPAEVLINAGDRTMLQYLLKPARNMFAESL 438
              G    LQ GM     I   ++  +  +         ESL
Sbjct: 538 VSHGREIPLQSGMSVTANIRVREKRTVMSIFTELFTKKIESL 579



 Score = 58.2 bits (139), Expect = 7e-13
 Identities = 84/376 (22%), Positives = 155/376 (41%), Gaps = 82/376 (21%)

Query: 26  IGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLV 85
           +G+TVV VT      WA+ A +   V  TG +   +  K +     G+VKE+   +   V
Sbjct: 71  MGVTVVAVT------WASIATIEQVVPATGQLKPLDTVKDINAPLNGVVKEVLVENNRKV 124

Query: 86  KKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSIPSVIMEGTDSDRAQE 145
           KKG+ L+++D S       STR +L  A+   +++  E     ++    +EG+   RA  
Sbjct: 125 KKGEVLVIMDSS-------STRAELTAAQNIRSKVLQENAFYRTLLQNGLEGSTLQRAIS 177

Query: 146 ALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRTKAGLNKSYSGEIKQLKE 205
            L    +V           +++   R + + +     N + R + GL ++ SGE      
Sbjct: 178 QLNLPWEV-----------VALANNRAELINE-----NKLYRQQLGL-RNASGE------ 214

Query: 206 LLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAK 265
                    Q   EQ  +L+M + E+    S +T  +L+I + E Q+ Q   +  A+ ++
Sbjct: 215 --------GQLSAEQLSRLEMARFELG---SRVTAAELEIRQIEKQLQQASLQLRAERSQ 263

Query: 266 ELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPA 325
              D +     L   EAAL +    + I A               G+V++ TPLL+    
Sbjct: 264 LQEDQKILAGLLGRNEAALVEAEKSLAIEA---------------GIVNSMTPLLE---- 304

Query: 326 QSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEGKL-TRISADSLVEERSGDQ 384
                 E  +A   +++ +          + N  T  +IE K+ T +  D   ++    Q
Sbjct: 305 ------EGALARLQVEKQQ---------QSLNDRTQQLIEQKVNTVVEVDRQKQQIESRQ 349

Query: 385 YYLVRVKVTEDGMKKL 400
             + R++  +  ++ L
Sbjct: 350 AEIQRLETEQSRLQSL 365