Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 389 a.a., type I secretion membrane fusion protein, HlyD family from Phaeobacter inhibens DSM 17395

 Score =  150 bits (379), Expect = 7e-41
 Identities = 113/420 (26%), Positives = 203/420 (48%), Gaps = 53/420 (12%)

Query: 15  DLPTSDRGIRRIGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIV 74
           DL  + RG  RI + +V     +F  WA+FA +   V   G V   +  + VQ+LEGGI+
Sbjct: 7   DLRETSRGASRI-IYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGIL 65

Query: 75  KELHARDGDLVKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGL--DSIPS 132
            ELH   GD+VK G  L  L +++  A  +  ++++     K+ RL AE +G    ++P 
Sbjct: 66  AELHVHQGDVVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELEGAFDFNVPE 125

Query: 133 VIMEGTDSDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRTKAGL 192
            +     +DR+      E+ +  AR           RE + Q++ ++A +  + +     
Sbjct: 126 EL-----ADRSPGIYTSERALLNARQTDFTSRRDSAREILDQLKDELANMKRLHK----- 175

Query: 193 NKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQI 252
                      KE++A        L+E  R    +    A +    T+++L++ E     
Sbjct: 176 -----------KEIVA--------LIEVNRSQKSVSDAQAKYNEIGTQSELELAE----- 211

Query: 253 VQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGV 312
                    D +K L ++ +   +L+      +D+L+R VI +P +G+V  + V TIGGV
Sbjct: 212 ---------DYSKTLRELTSYRQELR----LAQDQLNRTVITSPMAGIVNSLAVTTIGGV 258

Query: 313 VSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEGKLTRIS 372
           +     +++I+P   ++ VEA+V P +I  ++ G+ A ++ SA++      + GK+  +S
Sbjct: 259 IRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFVS 318

Query: 373 ADSLVEERS--GDQYYLVRVKVTEDGMKKLGNR-KLQPGMPAEVLINAGDRTMLQYLLKP 429
           AD+  +ER+   + YY V VKV      +     +++PGM A   +  G +T+L Y+LKP
Sbjct: 319 ADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILNYMLKP 378