Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 415 a.a., toxin secretion, membrane fusion protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 52/370 (14%)

Query: 72  GIVKELHARDGDLVKKGDPLI-VLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSI 130
           G V  LH ++G  V  GDPL+ V+  S +++ +E +   +   + +++ L  E D     
Sbjct: 77  GNVDILHVKEGSDVNAGDPLVTVIIRSSMASGFELSETLISELKQQQSILNQELDN---- 132

Query: 131 PSVIMEGTDSDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAG-LNDMIRTK 189
                         E  A E    K R    L ++S + + + + +Q +A  LN  +  K
Sbjct: 133 ------------NIELNAAETLRLKKR----LSDLSESMKVLSRQKQLLADKLNIQVAQK 176

Query: 190 AGLNKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETE 249
                      KQ  +L  +G++       Q  KL  +K EV + +S+      ++ +T 
Sbjct: 177 -----------KQHDKLYKDGYLSELDYQLQLSKLIEVKQEVENLESNKISIDRELNQTH 225

Query: 250 LQIVQLKKKFD---ADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKV 306
            ++V L  +F+   +DV K  SD+Q Q+ + +             VIRA ESG V  + V
Sbjct: 226 AELVSLPFQFNLKQSDVHKRQSDIQRQLNEAENSYT--------FVIRAQESGTVAAVSV 277

Query: 307 HTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEG 366
              G  +++  PL+ I+P  S LV E  +  R    ++ G  A +RF AF       +  
Sbjct: 278 -VEGEFIASNRPLMSIIPKGSSLVAELLLPTRSAGFVKQGDEARLRFDAFPYQRFGFLHS 336

Query: 367 KLTRISADSLVEERS------GDQYYLVRVKVTEDGMKKLGNR-KLQPGMPAEVLINAGD 419
           ++ R+    L++  +       +  Y ++  ++   M+  G    L+ GM  E  I    
Sbjct: 337 EVLRVDKALLLDGEADLPVKLSEPVYRIKTTLSAQDMQAYGEAFPLKSGMLLEADIVLDR 396

Query: 420 RTMLQYLLKP 429
           RT+L +LL P
Sbjct: 397 RTLLDWLLDP 406