Pairwise Alignments

Query, 366 a.a., dTDP-glucose 4,6-dehydratase 2 from Pseudomonas putida KT2440

Subject, 354 a.a., nucleotide sugar epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  109 bits (273), Expect = 1e-28
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 39/356 (10%)

Query: 1   MILVTGGAGFIGSNFVLQWCAHNEE-PVLNLDALTYAGNLA----NLQPLEG-NPQHRFV 54
           ++LVTG AGFIG+N V +     +   V+ +D++T   ++      LQ L     +  F+
Sbjct: 12  VVLVTGAAGFIGANLVKRLLNEFDSVKVIGIDSITEYYDVRLKYERLQELSAYGDRFVFI 71

Query: 55  QGNICDAALLTKLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAHW 114
           + +I    ++  +F  + P+ VV+ AA++ V  SIT P+A++E+N++G + +LE+ R H 
Sbjct: 72  KDSIAKKEIVESIFTNYHPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILESCRHH- 130

Query: 115 NSLEGAEKEAFRFLHVSTDEVYGTLGPNDPAFTETTPYAPNSPYSASKAASDHLVRSYFH 174
            S+E         ++ S+  VYG+     P  T+     P S Y+A+K +++ +  +Y  
Sbjct: 131 -SVE-------HLVYASSSSVYGS-NKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSK 181

Query: 175 TYGMPVLTTNCSNNYGPLHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGI 234
            Y +P         YGP   P+            GK + ++  G   RD+ YV+D   GI
Sbjct: 182 LYNIPSTGLRFFTVYGPCGRPDMAYFGFTNKLREGKTIQIFNYGNCKRDFTYVDDIVEGI 241

Query: 235 RRVLE------AGAFG------ETYNIGGWNEKANIDIVRTLCSLLDEMAPAASRQVINQ 282
             +++       G  G      + YNIG  + +  +D V    ++L E   AA  +V+  
Sbjct: 242 VCIMQHAPEKKNGEDGLPIPPYKVYNIGNNSPENLLDFV----TILQEELIAA--KVL-- 293

Query: 283 KTGEPVEQYAELIAYVTDRPGHDRRYAIDARKIERELGWKPAETFETGIRKTVAWY 338
                 E + EL+     +PG       D   +E++ G+KP+ +   G+R    WY
Sbjct: 294 PDDYDFETHKELVPM---QPGDVSVTYADTTSLEQDFGFKPSISLRKGLRAFAQWY 346