Pairwise Alignments

Query, 100 a.a., Integration host factor subunit beta from Pseudomonas putida KT2440

Subject, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 3e-18
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1  MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV 60
          M K+ELI +I  +  +  ++    A+K+    +++ +  GD+I I GFGSF    RA R 
Sbjct: 1  MNKTELIAKIAENADITKAQATR-ALKSFEAAITESMKNGDKISIVGFGSFETTTRAART 59

Query: 61 GRNPKTGQSVSLEGKFVPHFKPGKELRDRVN 91
          GRNP+TG+ + +    VP FK GK LRD VN
Sbjct: 60 GRNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90