Pairwise Alignments

Query, 324 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 33/297 (11%)

Query: 11  GLFLALLTALLWGILPIKLKQVLQVVDPITVTWYRLLVSGGLLFAWLAAQRRLPSMRKLA 70
           G+ L  LT + WGI  +  K +L+ + PIT+ + R++++  +L  ++         R   
Sbjct: 7   GILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFI---------RNFT 57

Query: 71  PRGKG----LVLVAVLGLMGNYVLYLIGLKLLSPGTAQLVVQIGPVLLLVASVFVFRERF 126
              K     +VL   LG+   Y+   + LK  +   A L+    P+  L+ S  V ++  
Sbjct: 58  KYSKEDFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIP 117

Query: 127 SVGQGMGLLVLLAG-FGLFFNQRLEELLTSLGTYTTGVLTILLATSIWVFYALSQKQLLT 185
           S  +  G L+ L G F L  N +    L  LG      + +  A   WV Y     Q L 
Sbjct: 118 SKIKYFGSLIGLFGVFILILNGKFVLELNPLGD-----ILMFGAVCTWVLYTF-VIQKLQ 171

Query: 186 VWHSQQVMMVIYLSCAALLTPWVHPLEALQLTPVQGWLLLACCLNTLVAY-----GAFAE 240
                +V   I L  A    P+      +      G       LN  +A+       F  
Sbjct: 172 KHDDLKVTRDITLIGAVFFIPF-----TIMELGYNGMFEFTILLNPYIAFSLLYLAIFCS 226

Query: 241 ALAH--WEASRVSATLALTPLVTFVAVALAAWVWPEYVHAEDINALGYVGAVTVVFG 295
           A+A+  W  +   A  + T    ++ + + A +    +     N    +GAV V+FG
Sbjct: 227 AIAYLFWNMAIRLAGASTTTNGVYI-IPIVAMITDAIILKNIPNIYAIIGAVLVLFG 282