Pairwise Alignments

Query, 394 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 387 a.a., peptidase M42 (NCBI) from Rhodospirillum rubrum S1H

 Score =  399 bits (1025), Expect = e-116
 Identities = 196/362 (54%), Positives = 253/362 (69%)

Query: 9   DLDYLKRVLLEMLAIPSPTGFTDTIVRYVAERLDELGIPFELTRRGTIRATLKGRQATPD 68
           D DYL R L+ +LA PSPTG+TDT+VR     L+ LG+   LTRRG +   L+GR+A P 
Sbjct: 7   DTDYLARTLVRLLATPSPTGYTDTVVRETCAELESLGLTPTLTRRGAVCVVLRGREARPA 66

Query: 69  RAVSAHLDTIGASVRQLQDNGRLALAPVGCWSSRFAEGSRVSVFTDTGVFRGSVLPLMAS 128
           RA+ +HLDT+GA V+QL+DNGRL L P+G WS+RFAEG+RV+VFTD G  RG++LPL AS
Sbjct: 67  RAIVSHLDTLGAQVKQLKDNGRLELVPIGTWSARFAEGARVTVFTDRGAVRGTILPLKAS 126

Query: 129 GHAFNTAIDQMPISWDHVEVRLDAYCATRADCEALGVSIGDFVAFDPLPEFTESGHISAR 188
           GH FN  ID +PI W   E+R+DA   ++AD  ALG+ +GD VA DP PEF  +G+I +R
Sbjct: 127 GHIFNEEIDSLPIGWPMTELRVDARVHSKADLIALGIEVGDIVAIDPQPEFLANGYIVSR 186

Query: 189 HLDDKAGVAALLAALKAVVESGRQPLIDCHPLFTITEETGSGAAGALPWDVSEFVGIDIA 248
           HLDDKAGVA +LAALKA+      P +D H +FTI EE G GA+ AL  DV+  V +D  
Sbjct: 187 HLDDKAGVALMLAALKALTAHNEPPPVDVHFIFTIAEEVGVGASSALTDDVASVVAVDNG 246

Query: 249 PVAPGQASSEHAVSVAMQDSSGPYDYHLSRHLLKLAGDHDLPVRRDLFRYYFSDAHSAVT 308
              PGQ S+E  V++AM D +GP+DYHL+R L++L  D D+  R+D+FRYY SDA SAV 
Sbjct: 247 TSGPGQNSAEFGVTIAMADQTGPFDYHLTRALIRLCRDEDIIFRKDVFRYYRSDAASAVV 306

Query: 309 AGHDIRTALVAFGCDATHGYERTHIDSLAALSRLLSAYLLSPPVFASDSQPANTSLERFS 368
           AGHD+R ALV FG DA+HGYER H+ +L +++ LLSAY LSP     D+      L  F+
Sbjct: 307 AGHDVRNALVTFGIDASHGYERIHMHALRSVAELLSAYALSPVEIRRDAVETARGLAGFT 366

Query: 369 HQ 370
            Q
Sbjct: 367 RQ 368