Pairwise Alignments

Query, 554 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 572 a.a., actP-like component of L-lactate and L-malate uptake system (from data) from Shewanella loihica PV-4

 Score =  165 bits (418), Expect = 4e-45
 Identities = 130/492 (26%), Positives = 226/492 (45%), Gaps = 61/492 (12%)

Query: 48  AFTLGITYWASKRNKSASDYYAAGGKITGFQNGLAIAGDYMSAASFLGISALVFTSGYDG 107
           A  +GI  W+  R  S  ++Y AGG +    NG+A A D+MSAASF+ ++ +V   GYDG
Sbjct: 16  ALYIGIAIWS--RAGSTKEFYVAGGGVHPVMNGMATAADWMSAASFISLAGIVSFVGYDG 73

Query: 108 LIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQKEIRTLSASGSLVVVAFYLI 167
            +Y +G+  G+ ++   +A  LR  GK+T  D    R   +  RT++   ++ +   Y+ 
Sbjct: 74  SVYLMGWTGGYVLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAIFICFTYIA 133

Query: 168 AQMVGAGKLIELLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSG----A 223
            QM G G +      ++    V +   ++  Y + GGM   T+ Q+ +  +L+      A
Sbjct: 134 GQMRGVGVVFSRFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPA 193

Query: 224 SFMALMVMKHV----GFDFNTL----FSEAIKVHAKGEAIMSPGGL------VKDPISAF 269
            F+++M+  H+    GF    +     +  + +  K + + +  G        K  I  F
Sbjct: 194 IFISVMMTGHILPQLGFGAELVDAAGNNTGVYLLEKLDGLSAQLGFSQYTEGSKGMIDVF 253

Query: 270 SLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFY-ILTFIIGFGAILLVS 328
            +  ALMFGTAGLPH+++RFFTV   K+AR S  +A  FI   Y  +  +  F  + ++ 
Sbjct: 254 FITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALAAFSRVNMIE 313

Query: 329 T--NPEFKDAAGALL----------------GGNNMAAVHLANAVGGSV----------- 359
           T   PE    A                      NN   ++ A      +           
Sbjct: 314 TINGPESTGVAYETAPDWIKNWEKTGLIKWDDKNNDGKIYYAKGETNEMKIDRDIMVLAT 373

Query: 360 ---------FLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVWRKGKANDKDEIRVS 410
                     +  ++A   A  L+  AGL L  +++VSHDL    +     +DK E+  +
Sbjct: 374 PEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDLLKKNFMP-DISDKQELLYA 432

Query: 411 KITTVALGVLAIGLGILFEKQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGG 470
           +I   ALG++  G   +     +A +V +AF +AAS  FP +++ ++ + +   GA+ G 
Sbjct: 433 RI-AAALGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSRTMNKEGAIAGM 491

Query: 471 WLGLVSAVTLMI 482
            +GL+ + + +I
Sbjct: 492 VIGLLFSASYII 503