Pairwise Alignments

Query, 554 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 598 a.a., Na+/solute symporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  160 bits (406), Expect = 1e-43
 Identities = 142/523 (27%), Positives = 236/523 (45%), Gaps = 87/523 (16%)

Query: 35  LNVSAIAMFVAFVAFTL--GITYWASKRNKSASDYYAAGGKITGFQNGLAIAGDYMSAAS 92
           ++ + + + V  ++F L  GI  WA  R  S S++YAAG  +    NG+A A D+MSAAS
Sbjct: 1   MDQTTLNIIVVGLSFALYFGIAIWA--RAGSTSEFYAAGRGVNPVVNGMATAADWMSAAS 58

Query: 93  FLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQKEIRT 152
           F+ ++ L+   GY    + +G+  G+ ++  L+A  LR  GK+T  +    R    + R 
Sbjct: 59  FISMAGLIAFVGYSNSSFLMGWTGGYVLMALLLAPYLRKFGKFTVPEFIGDRFYSTKARV 118

Query: 153 LSASGSLVVVAFYLIAQMVGAGKLIELLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQ 212
           +     +V+   Y+I QM GAG        +     ++    ++ +Y + GGM   T+ Q
Sbjct: 119 VGVICLIVISTTYVIGQMTGAGVAFSRFLEVSSTTGLVTASCVVFVYAVLGGMKGITYTQ 178

Query: 213 IIKAVLLLSGASFMALMVMKHV---GFDFNTLFSEAI--KVHAKGEAIMSPGGLVKD-PI 266
           + + V+L+   +  A+ +   +         LFS     +V A    +++  GL+ D   
Sbjct: 179 VAQYVVLIIAYTIPAIFISLQLTGNPIPGLGLFSNMAPGQVGAGEPLLVTLDGLLTDLGF 238

Query: 267 SAFSLG----------LALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILT 316
           +A++ G          L+LM GTAGLPH+++RFFTV    +AR S  +   FI   Y+  
Sbjct: 239 NAYTTGSSPFLMALFTLSLMIGTAGLPHVIIRFFTVPRVADARISAGWTLVFIALLYLTA 298

Query: 317 FIIGFGA-------------------ILLVSTNPEF------------------------ 333
             +G  A                   I ++  +PE+                        
Sbjct: 299 PAVGAMARLNITDLMWPEGTQGEAVTIEMIQNDPEYAWMNTWQQTGLLGWEDKNGDGRIQ 358

Query: 334 ----------KDAAGALLGGNNM----------AAVHLANAVGGSVFLGFISAVAFATIL 373
                     + A  A   GN +          A   +AN  G  + L  I+A   A  L
Sbjct: 359 YYNDANPSMTERAEAAGWQGNELTNFNRDILVLANPEIANLPGWVIAL--IAAGGIAAAL 416

Query: 374 AVVAGLTLAGASAVSHDLYASVWRKGKANDKDEIRVSKITTVALGVLAIGLGILFEKQNI 433
           +  AGL LA +SA+SHDL  +V+     ++K E+  ++I+     V+A  LG L      
Sbjct: 417 STAAGLLLAISSAISHDLIKTVFNP-SISEKGELLAARISMAGAIVVATYLG-LNPPGFA 474

Query: 434 AFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVS 476
           A +V LAF +AA+  FP L++ ++ K++   GA  G  +GL+S
Sbjct: 475 AQVVALAFGLAAATLFPALMMGIFSKRINASGATWGMLVGLIS 517