Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 246 a.a., L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  132 bits (333), Expect = 6e-36
 Identities = 72/231 (31%), Positives = 125/231 (54%), Gaps = 8/231 (3%)

Query: 54  IKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNKDNVVDYGPNFKD 113
           ++  L   VKL     GI +Q +A G +D +   WLP TH  ++ K +D + D G  + +
Sbjct: 1   LRDHLTQPVKLVLADIGIQFQALANGNIDLIPMVWLPSTHKAFYDKYQDKLEDLGVLY-E 59

Query: 114 AKIGLIVPEYVKAVSIADLKTDNSFKDR------IVGIDAGSGVMLKTDQAIKDYGLTSY 167
            +IG+ VP  +    IA ++  N  + R      I+  + G+G    T++AI++Y L  Y
Sbjct: 60  GRIGMAVPTSIPTSEIASVEDLNKPEVREKLGGKILTSEVGNGQYKLTEKAIQEYKLDGY 119

Query: 168 KLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYGAAETVNSIG 227
           K+ ASS + M +EL R   + +   +  W PHWMFAKW L++L+DPK ++G AE ++++ 
Sbjct: 120 KMVASSESGMLSELDRNLKRDKWSLINAWSPHWMFAKWPLRYLDDPKQIFGGAEQIHAVA 179

Query: 228 SKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVAKHP 278
            K  + + P+VA F   F    K ++ ++M   ++ +  +  A+ + A  P
Sbjct: 180 RKGFSAEHPDVARFFANFK-IPKADLEKLMSTARDSSADKVVAEYYAANKP 229