Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 318 a.a., glycine betaine-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 22/293 (7%)

Query: 10  RFLGVGTALVMAMSAAQAMAKEV----SIGYVD-GWADSVATTNVAAEVIKQKLGYDVKL 64
           +F+  G   +  ++A  A A E     ++ + D GW D  ATT  A  ++ + LGY+  +
Sbjct: 8   KFMLAGAVCMATLTAGSAFAAEPESCGTVRFSDVGWTDITATTATATTIL-EALGYETDV 66

Query: 65  QAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNKDNVVD-YGPNFKDAKIGLIVPEY 123
           + ++  + +  +    +D  L  W+P    +     +D  V+    N   AK  L     
Sbjct: 67  KVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAK 126

Query: 124 VKAVSIADLKTDNSFKD----RIVGIDAGS-GVMLKTDQAIKD-YGLTSYKLQASSGAAM 177
              + I D K   + KD    +I GI+ G+ G  L  D   K  + L  +++  SS   M
Sbjct: 127 GAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGM 186

Query: 178 TAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYG---AAETVNSIGSKELATK 234
            A++ RA      I   GW PH M A +KL +L     V+G      TV++       T+
Sbjct: 187 LAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTE 246

Query: 235 APEVAEFLK--KFNWQSKDEI-GEVMLAIQEGAKPEAAAKDWVAKHPDRVKEW 284
            P V + L+   F+ Q ++EI G++   + +G  PE AA  W+  +P  ++ W
Sbjct: 247 CPNVGKLLQNLSFSLQMENEIMGKI---LNDGEDPEKAAAAWLKDNPQSIEPW 296