Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 312 a.a., glycine-betaine-binding protein from Sinorhizobium meliloti 1021

 Score =  108 bits (269), Expect = 2e-28
 Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 20/293 (6%)

Query: 8   MRRFLGVGTALVMAMSAAQAMAKEV--SIGYVD-GWADSVATTNVAAEVIKQKLGYDVKL 64
           +++   +   L+M +  A A   E   ++ + D GW D  +TT VA+ ++ + LGY  + 
Sbjct: 2   LKQITAMTAGLLMTIGVAAAAEPESCKTVRFSDVGWTDITSTTAVASTIL-EALGYAPQS 60

Query: 65  QAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNKDNVVDY-GPNFKDAKIGLIVPEY 123
           + ++  + +  +    +D  L  W P    +     +D  ++  GPN   AK    VP+Y
Sbjct: 61  KLLSIPVTYASMKNKDIDVYLGDWQPSMEADRKPFLEDKSIEVIGPNLTGAKYTFAVPKY 120

Query: 124 VKAVSIADLKTDNSFKDR----IVGIDAGS-GVMLKTDQAIK-DYGLTSYKLQASSGAAM 177
           V    + D+     F D+    I GI+ G+ G  +  D   K D+GLT ++L  SS   M
Sbjct: 121 VADAGVKDISDLQKFPDKFGRKIYGIEPGNNGNRMILDMINKGDFGLTGWELVESSEQGM 180

Query: 178 TAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGV----YGAAETVNSIGSKELAT 233
            AE+ RA    Q I   GW PH M  ++++ +L          YG A+   +I +   A 
Sbjct: 181 LAEVERATKDDQWIVFLGWAPHPMNTRYQIDYLSGADAYFGPNYGGADIYTNIRA-GYAQ 239

Query: 234 KAPEVAEFLK--KFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVAKHPDRVKEW 284
           + P VA F+   +F  + ++EI   +L   +G  P+ AA DW+  HP+ V  W
Sbjct: 240 ECPNVARFVTNLRFTLEMENEIMNGIL--NDGNDPKDAAADWLKAHPEAVAPW 290