Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  171 bits (432), Expect = 2e-47
 Identities = 94/250 (37%), Positives = 138/250 (55%), Gaps = 5/250 (2%)

Query: 40  WADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAK 99
           W      +NV  +VI ++ GY+V+L  +  GI +  +A G LD  L+ WLP TH EYW +
Sbjct: 43  WPGVTVKSNVV-KVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTHEEYWTQ 101

Query: 100 NKDNVVDYGPNFKDAKIGLIVPEYVKAV---SIADLK-TDNSFKDRIVGIDAGSGVMLKT 155
             + +     N     +GL VP Y       SI DL   +  F  +I+GI+ G+G+M  T
Sbjct: 102 YGNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEPGAGIMSNT 161

Query: 156 DQAIKDYGLTSYKLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKG 215
           ++AI  Y L+ Y+LQ+SS  AM AEL RA  + ++I VT W PH +F K+ +K L+DP+ 
Sbjct: 162 EKAIDSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEK 221

Query: 216 VYGAAETVNSIGSKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAAKDWVA 275
           VYG  + V +I   +     PEV EF +KF      +   +     EG  PE  A++WVA
Sbjct: 222 VYGDGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVA 281

Query: 276 KHPDRVKEWT 285
            +P+ V+ WT
Sbjct: 282 NNPELVENWT 291