Pairwise Alignments

Query, 382 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 374 a.a., patatin (RefSeq) from Shewanella loihica PV-4

 Score =  261 bits (668), Expect = 2e-74
 Identities = 154/383 (40%), Positives = 221/383 (57%), Gaps = 15/383 (3%)

Query: 4   PPVTGLILSGGGARAAYQVGVLAGIAELLPAGADNPFPVIVGTSAGAINAVTLASGAVHF 63
           P  T L+L GGGARAAYQVGVL  I +  P     PF +I GTSAGAIN  ++A+ A  F
Sbjct: 2   PDKTALVLGGGGARAAYQVGVLKAIVQFYPRNHGVPFKIICGTSAGAINGTSIATHASCF 61

Query: 64  NDAVQRLTAFWQNFRSHLVIRSDWPGVVRQASRFVGHSLLGLG----GQAPVALLDSSPL 119
           +  V++L   W++F +H V RS + G+    ++    +L+GL          +L D+ PL
Sbjct: 62  HLGVRKLEWVWRHFSTHKVYRSSFGGIFSHLAQM---ALMGLQDVKINTEAGSLFDNQPL 118

Query: 120 RSLLQTHLNLDGIGHALAAEQLRAVAVTAFGYESGQAVTFYQGRGTIEAWLRHRRIGVPA 179
           R+LL   +N + I   +A   L A++V    Y S ++V+F+Q    I+ W R RR G   
Sbjct: 119 RNLLNNLINFERIDRNIANGALHALSVDTSCYNSSRSVSFFQAAKEIDEWNRARRGGQRT 178

Query: 180 PLTIDHLLASAAIPLLFAPVQLGGEYYGDGAVRQSAPISPALHLGASRVLVVGVSGNPQR 239
            L  +HLLASAAIPL+F  V+L   YYGDG+V Q AP+S  +HLGA +++V+ +      
Sbjct: 179 HLHTEHLLASAAIPLVFPSVKLNRGYYGDGSVHQLAPLSSPIHLGAEKIMVINLE----- 233

Query: 240 PAPPVPPQRVFSGQQPSLAQIGGHMLNSTFIDSLEGDIELLQRLNHLSGLLPAHLDARRL 299
            +P     + F    P  A I GH+L++ F D+L  D+E LQR+N    L+P        
Sbjct: 234 -SPHKQVHKEFE-HHPKTATIAGHLLDTIFSDTLNSDLERLQRINSTLNLIPKE-RRHEA 290

Query: 300 GLAPIDVLVVAPSQPLDEIAARHRRELPAALRLFLRGPGATRTSGAGVLSYLLFEASYCS 359
            L  ID LV+ PS+ L  IAA+H +++P A++  LR  G  + S + ++SYLLFE SYCS
Sbjct: 291 SLKTIDTLVIKPSEDLSLIAAQHYQDMPMAVKALLRLIGINQQSDSSIVSYLLFEQSYCS 350

Query: 360 ELIELGRKDALAKKRELCEFLGI 382
            LI LG +DA+ +  E+  F  I
Sbjct: 351 ALINLGYQDAMCQIDEIKAFFNI 373