Pairwise Alignments

Query, 717 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 6e-16
 Identities = 56/239 (23%), Positives = 116/239 (48%), Gaps = 10/239 (4%)

Query: 470 VHHALVRSRRGLANAR-AQTMMPLIRNVMFVVIFIIAVIVALANMGMNVTPLLAGAGVIG 528
           V   +VRS     N R +  M     ++   V+++I ++V L+ +G+N+ P+L G G+ G
Sbjct: 321 VTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAG 380

Query: 529 LAIGFGAQSLVADLITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHT 588
           + IGF  Q  +++   G+ ++I     + D+V  GG  G V  +++    +R  D  +  
Sbjct: 381 VIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIII 440

Query: 589 IPFSEI--KSIKNYSREFGYAIFRV-AIPHSMNIDQAISLVREVGQKLRNDPLMRRNIWS 645
           +P S+I    IKN + E    +  V  I +S ++ +A +++ ++   +++ P + +    
Sbjct: 441 VPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDI---VKSHPAVLKTPEP 497

Query: 646 PLELQGVESFESGSAILRARFKTAPIKQWEVSRAFNLALKRQLDEAGLDLATPRLSVQV 704
            +++  + +  S   I+R   KT     W+V       +K + D  G+ +  P+  V +
Sbjct: 498 NIKVHTLNT-SSIDFIVRPWVKTD--DYWDVYWDVTKEVKLRFDREGISIPFPQQDVHL 553